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Biological systems are often modeled as a system of ordinary differential equations (ODEs) with time-invariant parameters. However, cell signaling events or pharmacological interventions may alter the cellular state and induce multi-mode…

Quantitative Methods · Quantitative Biology 2020-04-28 Bing Liu

Lesions are injuries and abnormal tissues in the human body. Detecting lesions in 3D Computed Tomography (CT) scans can be time-consuming even for very experienced physicians and radiologists. In recent years, CNN based lesion detectors…

Computer Vision and Pattern Recognition · Computer Science 2019-09-30 Ning Zhang , Dechun Wang , Xinzi Sun , Pengfei Zhang , Chenxi Zhang , Yu Cao , Benyuan Liu

The immune system provides an ideal metaphor for anomaly detection in general and computer security in particular. Based on this idea, artificial immune systems have been used for a number of years for intrusion detection, unfortunately so…

Neural and Evolutionary Computing · Computer Science 2010-07-05 Uwe Aickelin , Julie Greensmith

With the advancement of high-throughput biotechnologies, we increasingly accumulate biomedical data about diseases, especially cancer. There is a need for computational models and methods to sift through, integrate, and extract new…

Quantitative Methods · Quantitative Biology 2020-07-03 Thomas Gaudelet , Noel Malod-Dognin , Natasa Przulj

Introduction: The present study on the development and evaluation of an automated brain tumor segmentation technique based on deep learning using the 3D U-Net model. Objectives: The objective is to leverage state-of-the-art convolutional…

Image and Video Processing · Electrical Eng. & Systems 2024-04-10 Suman Sourabh , Murugappan Valliappan , Narayana Darapaneni , Anwesh R P

Technology aided platforms provide reliable tools in almost every field these days. These tools being supported by computational power are significant for applications that need sensitive and precise data analysis. One such important…

Computer Vision and Pattern Recognition · Computer Science 2020-03-16 Muhammad Ali Farooq , Muhammad Aatif Mobeen Azhar , Rana Hammad Raza

Understanding control mechanisms in biological systems plays a crucial role in important applications, for instance in cell reprogramming. Boolean modeling allows the identification of possible efficient strategies, helping to reduce the…

Molecular Networks · Quantitative Biology 2021-12-21 Laura Cifuentes-Fontanals , Elisa Tonello , Heike Siebert

An immune system inspired Artificial Immune System (AIS) algorithm is presented, and is used for the purposes of automated program verification. Relevant immunological concepts are discussed and the field of AIS is briefly reviewed. It is…

Neural and Evolutionary Computing · Computer Science 2009-05-19 Soumya Banerjee

We present a method for automatic cell classification in tissue samples using an automated training set from multiplexed immunofluorescence images. The method utilizes multiple markers stained in situ on a single tissue section on a robust…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Alberto Santamaria-Pang , Anup Sood , Dan Meyer , Aritra Chowdhury , Fiona Ginty

Artificial intelligence (AI) has shown great promise for diagnostic imaging assessments. However, the application of AI to support medical diagnostics in clinical routine comes with many challenges. The algorithms should have high…

Computer Vision and Pattern Recognition · Computer Science 2020-08-17 Milda Pocevičiūtė , Gabriel Eilertsen , Claes Lundström

Building and deploying machine learning solutions in healthcare remains expensive and labor-intensive due to fragmented preprocessing workflows, model compatibility issues, and stringent data privacy constraints. In this work, we introduce…

Artificial Intelligence · Computer Science 2025-07-25 Soorya Ram Shimgekar , Shayan Vassef , Abhay Goyal , Navin Kumar , Koustuv Saha

Retinal imaging has emerged as a powerful, non-invasive modality for detecting and quantifying biomarkers of systemic diseases-ranging from diabetes and hypertension to Alzheimer's disease and cardiovascular disorders but current insights…

Image and Video Processing · Electrical Eng. & Systems 2025-05-28 Tariq M Khan , Toufique Ahmed Soomro , Imran Razzak

Lung cancer is the second most common cancer and the leading cause of cancer-related deaths worldwide. Survival largely depends on tumor stage at diagnosis, and early detection with low-dose CT can significantly reduce mortality in…

Cancer cachexia is a multifactorial syndrome characterized by progressive muscle wasting, metabolic dysfunction, and systemic inflammation, leading to reduced quality of life and increased mortality. Despite extensive research, no single…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Sabeen Ahmed , Nathan Parker , Margaret Park , Evan W. Davis , Jennifer B. Permuth , Matthew B. Schabath , Yasin Yilmaz , Ghulam Rasool

Zero-Input AI (ZIA) introduces a novel framework for human-computer interaction by enabling proactive intent prediction without explicit user commands. It integrates gaze tracking, bio-signals (EEG, heart rate), and contextual data (time,…

Human-Computer Interaction · Computer Science 2025-12-30 Aditi De

Cancer is one of the most dangerous diseases to humans, and yet no permanent cure has been developed for it. Breast cancer is one of the most common cancer types. According to the National Breast Cancer foundation, in 2020 alone, more than…

Image and Video Processing · Electrical Eng. & Systems 2022-03-10 Ali Bou Nassif , Manar Abu Talib , Qassim Nasir , Yaman Afadar , Omar Elgendy

Detecting and classifying lesions in breast ultrasound images is a promising application of artificial intelligence (AI) for reducing the burden of cancer in regions with limited access to mammography. Such AI systems are more likely to be…

Computer Vision and Pattern Recognition · Computer Science 2024-07-02 Arianna Bunnell , Yannik Glaser , Dustin Valdez , Thomas Wolfgruber , Aleen Altamirano , Carol Zamora González , Brenda Y. Hernandez , Peter Sadowski , John A. Shepherd

Penetration testing (or pentesting) is one of the widely used and important methodologies to assess the security of computer systems and networks. Traditional pentesting relies on the domain expert knowledge and requires considerable human…

Cryptography and Security · Computer Science 2019-08-21 Ge Chu , Alexei Lisitsa

Early detection of inflammatory arthritis (IA) is critical to efficient and accurate hospital referral triage for timely treatment and preventing the deterioration of the IA disease course, especially under limited healthcare resources. The…

Machine Learning · Computer Science 2024-08-01 Bing Wang , Weizi Li , Anthony Bradlow , Antoni T. Y. Chan , Eghosa Bazuaye

The field of medical imaging is an essential aspect of the medical sciences, involving various forms of radiation to capture images of the internal tissues and organs of the body. These images provide vital information for clinical…

Artificial Intelligence · Computer Science 2023-06-21 Shuvra Sarker , Angona Biswas , MD Abdullah Al Nasim , Md Shahin Ali , Sai Puppala , Sajedul Talukder
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