Related papers: Measurable events indexed by trees
With advances in sequencing technologies, there are now massive amounts of genomic data from across all life, leading to the possibility that a robust Tree of Life can be constructed. However, "gene tree heterogeneity", which is when…
We consider the problem of computing the measure of a regular set of infinite binary trees. While the general case remains unsolved, we show that the measure of a language can be computed when the set is given in one of the following three…
We consider a uniform spanning tree in a $\delta$-square grid approximation of a planar domain $\Omega$. For given integer $n\ge 2$, we condition the tree on the following $n$-arm event: we pick $n$ branches, emanating from $n$ points…
We prove that there is $c>0$ such that for all sufficiently large $n$, if $T_1,\dots,T_n$ are any trees such that $T_i$ has $i$ vertices and maximum degree at most $cn/\log n$, then $\{T_1,\dots,T_n\}$ packs into $K_n$. Our main result…
The celebrated formula of Otter \emph{[Ann. of Math. (2) 49 (1948), 583--599]} asserts that the complete graph contains exponentially many non-isomorphic spanning trees. In this paper, we show that every connected almost regular graph with…
Let $(X, \mfA,P)$, $(Y, \mfB,Q)$ be two arbitrary probability spaces and $\P:=\{(\mfA,P_y):y\in{Y}\}$ be a regular conditional probability on $\mfA$ with respect to $Q$. Denote by $R$ the skew product of $P$ and $Q$ determined by…
We consider the biased random walk on a tree constructed from the set of finite self-avoiding walks on a lattice, and use it to construct probability measures on infinite self-avoiding walks. The limit measure (if it exists) obtained when…
Lov\'asz (1967) showed that two graphs $G$ and $H$ are isomorphic if and only if they are homomorphism indistinguishable over the class of all graphs, i.e. for every graph $F$, the number of homomorphisms from $F$ to $G$ equals the number…
The history of gene families -- which are equivalent to event-labeled gene trees -- can to some extent be reconstructed from empirically estimated evolutionary event-relations containing pairs of orthologous, paralogous or xenologous genes.…
Rare events have played an increasing role in molecular phylogenetics as potentially homoplasy-poor characters.In this contribution we analyze the phylogenetic information content from a combinatorial point of view by consid-ering the…
Typically, models with a heterogeneous property are considerably harder to analyze than the corresponding homogeneous models, in which the heterogeneous property is replaced with its average value. In this study we show that any outcome of…
Given a class of graphs F, we say that a graph G is universal for F, or F-universal, if every H in F is contained in G as a subgraph. The construction of sparse universal graphs for various families F has received a considerable amount of…
Consider a tree network $T$, where each edge acts as an independent copy of a given channel $M$, and information is propagated from the root. For which $T$ and $M$ does the configuration obtained at level $n$ of $T$ typically contain…
We study tree-indexed random walks as introduced by Benjamini, H\"aggstr\"om, and Mossel, i.e. labelings of a tree for which adjacent vertices have labels differing by 1. It is a conjecture of those authors that the distribution of the…
Trees without vertices of degree $2$ are sometimes named topological trees. In this work, we bring forward the study of the inducibility of (rooted) topological trees with a given number of leaves. The inducibility of a topological tree $S$…
We investigate the connection between the abelian rank of a countable amenable group and the existence of good averaging sequences (e.g. for the pointwise ergodic theorem). We show that if $G$ is a group of abelian rank $r(G)$ then any…
An edge-colored rooted directed tree (aka arborescence) is path-monochromatic if every path in it is monochromatic. Let $k,\ell$ be positive integers. For a tournament $T$, let $f_T(k)$ be the largest integer such that every $k$-edge…
A homogeneous set of an $n$-vertex graph is a set $X$ of vertices ($2\le |X|\le n-1$) such that every vertex not in $X$ is either complete or anticomplete to $X$. A graph is called prime if it has no homogeneous set. A chain of length $t$…
Full binary trees naturally represent commutative non-associative products. There are many important examples of these products: finite-precision floating-point addition and NAND gates, among others. Balance in such a tree is highly…
The reliability of a phylogenetic inference method from genomic sequence data is ensured by its statistical consistency. Bayesian inference methods produce a sample of phylogenetic trees from the posterior distribution given sequence data.…