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Dense hard-particle packings are intimately related to the structure of low-temperature phases of matter and are useful models of heterogeneous materials and granular media. Most studies of the densest packings in three dimensions have…

Soft Condensed Matter · Physics 2015-05-13 Yang Jiao , Frank Stillinger , Sal Torquato

Lattice protein models, as the Hydrophobic-Polar (HP) model, are a common abstraction to enable exhaustive studies on structure, function, or evolution of proteins. A main issue is the high number of optimal structures, resulting from the…

Computational Engineering, Finance, and Science · Computer Science 2009-10-21 Martin Mann , Rolf Backofen , Sebastian Will

When placed in a crowded environment, a semi-flexible tube is forced to fold so as to make a more compact shape. One compact shape that often arises in nature is the tight helix, especially when the tube thickness is of comparable size to…

Statistical Mechanics · Physics 2009-11-11 Yehuda Snir , Randall D. Kamien

Optimization problems on probability measures in $\mathbb{R}^d$ are considered where the cost functional involves multi-marginal optimal transport. In a model of $N$ interacting particles, like in Density Functional Theory, the interaction…

Optimization and Control · Mathematics 2022-10-14 Ugo Bindini , Guy Bouchitté

In this paper we consider the ball and horoball packings belonging to $3$-dimensional Coxeter tilings that are derived by simply truncated orthoschemes with parallel faces. The goal of this paper to determine the optimal ball and horoball…

Metric Geometry · Mathematics 2021-07-20 Arnasli Yahya , Jenő Szirmai

We investigate the morphologies and maximum packing density of thin wires packed into spherical cavities. Using simulations and experiments, we find that ordered as well as disordered structures emerge, depending on the amount of internal…

Soft Condensed Matter · Physics 2011-05-30 N. Stoop , J. Najafi , F. K. Wittel , M. Habibi , H. J. Herrmann

Let $\Delta$ be the optimal packing density of $\mathbb R^n$ by unit balls. We show the optimal packing density using two sizes of balls approaches $\Delta + (1 - \Delta) \Delta$ as the ratio of the radii tends to infinity. More generally,…

Metric Geometry · Mathematics 2016-03-04 David de Laat

In this article we develop a duality principle and concerning computational method for a structural optimization problem in elasticity. We consider the problem of finding the optimal topology for an elastic solid which minimizes its…

Optimization and Control · Mathematics 2019-11-13 Fabio Botelho , Alexandre Molter

Resolvable designs with two blocks per replicate are studied from an optimality perspective. Because in practice the number of replicates is typically less than the number of treatments, arguments can be based on the dual of the information…

Statistics Theory · Mathematics 2009-09-29 J. P. Morgan , Brian H. Reck

Energy harvesting multi-hop networks allow for perpetual operation of low cost, limited range wireless devices. Compared with their battery operated counterparts, the coupling of energy and data causality constraints with half duplex relay…

Information Theory · Computer Science 2015-07-14 Oner Orhan , Elza Erkip

We consider three different continuum polymer models, that all depend on a tunable parameter r that determines the strength of the excluded-volume interactions. In the first model chains are obtained by concatenating hard spherocylinders of…

Soft Condensed Matter · Physics 2017-10-25 Giuseppe D'Adamo , Andrea Pelissetto

Dense polyhedron packings are useful models of a variety of condensed matter and biological systems and have intrigued scientists mathematicians for centuries. Recently, organizing principles for the types of structures associated with the…

Soft Condensed Matter · Physics 2011-09-28 Yang Jiao , Sal Torquato

We rigorously derive linear elasticity as a low energy limit of pure traction nonlinear elasticity. Unlike previous results, we do not impose any restrictive assumptions on the forces, and obtain a full $\Gamma$-convergence result. The…

Analysis of PDEs · Mathematics 2021-05-18 Cy Maor , Maria Giovanna Mora

Among lattice configurations of densely packed hard ellipses, Monte Carlo simulations are used to identify the so-called parallel and diagonal lattices as the two favourable states. The free energies of these two states are computed for…

Soft Condensed Matter · Physics 2024-03-27 Susanne Wagner , Gerhard Kahl , Roman Melnyk , Andrij Baumketner

We prove strong crystallization results in two dimensions for an energy that arises in the theory of block copolymers. The energy is defined on sets of points and their weights, or equivalently on the set of atomic measures. It consists of…

Analysis of PDEs · Mathematics 2013-11-11 D. P. Bourne , M. A. Peletier , F. Theil

Many foraging microorganisms rely upon cellular transport networks to deliver nutrients, fluid and organelles between different parts of the organism. Networked organisms ranging from filamentous fungi to slime molds demonstrate a…

Adaptation and Self-Organizing Systems · Physics 2020-12-08 Cassidy Mentus , Marcus Roper

When constructing models of the world, we aim for optimal compressions: models that include as few details as possible while remaining as accurate as possible. But which details -- or features measured in data -- should we choose to include…

Quantitative Methods · Quantitative Biology 2025-05-06 David P. Carcamo , Nicholas J. Weaver , Purushottam D. Dixit , Christopher W. Lynn

The structure of pipe networks minimizing the total energy dissipation rate is studied analytically. Among all the possible pipe networks that can be built with a given total pipe volume (or pipe lateral surface area), the network which…

Disordered Systems and Neural Networks · Physics 2010-09-08 Marc Durand

In this paper, we introduce a density-based topology optimization framework to design porous electrodes for maximum energy storage. We simulate the full cell with a model that incorporates electronic potential, ionic potential, and…

When the DNA double helix is subjected to external forces it can stretch elastically to elongations reaching 100% of its natural length. These distortions, imposed at the mesoscopic or macroscopic scales, have a dramatic effect on…

Materials Science · Physics 2009-11-13 Ryan Barnett , Paul Maragakis , Ari Turner , Maria Fyta , Efthimios Kaxiras