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Small changes to the parameters of a system can lead to abrupt qualitative changes of its behavior, a phenomenon known as bifurcation. Such instabilities are typically considered problematic, however, we show that their power can be…

Computer Science and Game Theory · Computer Science 2017-05-01 Ger Yang , Georgios Piliouras , David Basanta

Mixed methods for linear elasticity with strongly symmetric stresses of lowest order are studied in this paper. On each simplex, the stress space has piecewise linear components with respect to its Alfeld split (which connects the vertices…

Numerical Analysis · Mathematics 2025-07-18 Jay Gopalakrishnan , Johnny Guzman , Jeonghun J. Lee

Best subset selection is considered the `gold standard' for many sparse learning problems. A variety of optimization techniques have been proposed to attack this non-convex and NP-hard problem. In this paper, we investigate the dual forms…

Methodology · Statistics 2022-07-06 Shaogang Ren , Guanhua Fang , Ping Li

We combine a general formulation of microswimmmer equations of motion with a numerical bead-shell model to calculate the hydrodynamic interactions with the fluid, from which the swimming speed, power and efficiency are extracted. From this…

Soft Condensed Matter · Physics 2017-03-07 Bram Bet , Gijs Boosten , Marjolein Dijkstra , René van Roij

This research work is part of a PhD project aiming to design a new helicon plasma thruster for cargo space missions, within a collaboration between the School of Aerospace Engineering of La Sapienza University and the ENEA Frascati research…

The theory of elastic rods can be used to describe certain geometric and topological properties of the DNA molecules. A similar effective field theory approach was previously suggested to describe the conformations and dynamics of proteins.…

Biomolecules · Quantitative Biology 2019-09-04 Dmitry Melnikov , Alyson B. F. Neves

We investigate the elastic energy stored in a filament pair as a function of applied twist by measuring torque under prescribed end-to-end separation conditions. We show that the torque increases rapidly to a peak with applied twist when…

Soft Condensed Matter · Physics 2024-03-12 Julien Chopin , Animesh Biswas , Arshad Kudrolli

In modern network design, "efficiency" is often conflated with raw performance metrics like latency or aggregate throughput. This paper proposes a resource-centric definition of efficiency, isolating the hardware cost required to maintain a…

Networking and Internet Architecture · Computer Science 2026-01-28 Jia Xu Wei , Wei Wei

We use the method of dimensional reduction to show that a branching polymer with excluded volume interaction confined between two flat plates has, in the thermodynamic limit, a confinement free energy and density profile that is the same as…

Statistical Mechanics · Physics 2009-11-13 Rouzbeh Ghafouri , Joseph Rudnick , Robijn Bruinsma

Two-scale topology optimization, combined with the design of microstructure families with a broad range of effective material parameters, is increasingly widely used in many fabrication applications to achieve a target deformation behavior…

Graphics · Computer Science 2024-07-25 Davi Colli Tozoni , Zizhou Huang , Daniele Panozzo , Denis Zorin

We consider the problem of constructing an an optimal-weight tree from the 3*(n choose 4) weighted quartet topologies on n objects, where optimality means that the summed weight of the embedded quartet topologiesis optimal (so it can be the…

Data Structures and Algorithms · Computer Science 2011-11-09 Rudi Cilibrasi , Paul M. B. Vitanyi

In preference modelling, it is essential to determine the number of questions and their arrangements to ask from the decision maker. We focus on incomplete pairwise comparison matrices, and provide the optimal filling in patterns, which…

Optimization and Control · Mathematics 2025-09-04 Zsombor Szádoczki , Sándor Bozóki

We inverse engineer fast rotations of a linear trap with two ions for a predetermined rotation angle and time, avoiding final excitation. Different approaches are analyzed and compared when the ions are of the same species or of different…

Quantum Physics · Physics 2021-06-18 Ander Tobalina , Juan Gonzalo Muga , Ion Lizuain , Mikel Palmero

Lattice-model simulations and experiments of some small proteins suggest that folding is essentially controlled by a few conserved contacts. Residues of these conserved contacts form the minimum set of native contacts needed to ensure…

Biomolecules · Quantitative Biology 2011-09-14 Wei-Mou Zheng , Hui Zeng , Dong-Bo Bu , Ming-Fu Shao , Ke-Song Liu , Chao Wang

Given a simplicial complex with weights on its simplices, and a nontrivial cycle on it, we are interested in finding the cycle with minimal weight which is homologous to the given one. Assuming that the homology is defined with integer…

Algebraic Topology · Mathematics 2011-01-28 Tamal K. Dey , Anil N. Hirani , Bala Krishnamoorthy

The optimal kinematic parameters for the formation of the most stabilized products in direct three-body recombination Cs+ + Br- + R ---> CsBr + R with R = Hg, Xe, Kr are determined by the deformed polyhedron method for the third body energy…

Chemical Physics · Physics 2013-08-06 Ekaterina V. Ermolova , Lev Yu. Rusin

In this paper we introduce a simple variational model describing the ground state of a superconducting charge qubit. The model gives rise to a shape optimization problem that aims at maximizing the number of qubit states at a given gating…

Analysis of PDEs · Mathematics 2025-02-06 Dario Mazzoleni , Cyrill B. Muratov , Berardo Ruffini

We consider density functionals for exchange and correlation energies in two-dimensional systems. The functionals are constructed by making use of exact constraints for the angular averages of the corresponding exchange and correlation…

Strongly Correlated Electrons · Physics 2010-02-25 E. Rasanen , S. Pittalis

Concentrated solutions of short blunt-ended DNA duplexes, down to 6 base pairs, are known to order into the nematic liquid crystal phase. This self-assembly is due to the stacking interactions between the duplex terminals that promotes…

Soft Condensed Matter · Physics 2015-05-30 Cristiano De Michele , Tommaso Bellini , Francesco Sciortino

An energy-minimal simulation is proposed to study the patterns and mechanical properties of elastically crumpled wires in two dimensions. We varied the bending rigidity and stretching modulus to measure the energy allocation, size-mass…

Soft Condensed Matter · Physics 2009-11-13 Y. C. Lin , Y. W. Lin , T. M. Hong
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