Related papers: Affine and Projective Tree Metric Theorems
A k-dissimilarity D on a finite set X, |X| >= k, is a map from the set of size k subsets of X to the real numbers. Such maps naturally arise from edge-weighted trees T with leaf-set X: Given a subset Y of X of size k, D(Y) is defined to be…
In this paper, we propose a new method for the derivation of a priority vector from an incomplete pairwise comparisons (PC) matrix. We assume that each entry of a PC matrix provided by an expert is also evaluated in terms of the expert's…
Determining the interaction partners among protein/domain families poses hard computational problems, in particular in the presence of paralogous proteins. Available approaches aim to identify interaction partners among protein/domain…
While research on the geometry of planar graphs has been active in the past decades, many properties of planar metrics remain mysterious. This paper studies a fundamental aspect of the planar graph geometry: covering planar metrics by a…
With XML becoming an ubiquitous language for data interoperability purposes in various domains, efficiently querying XML data is a critical issue. This has lead to the design of algebraic frameworks based on tree-shaped patterns akin to the…
A spanning tree of a graph is a connected subgraph on all vertices with the minimum number of edges. The number of spanning trees in a graph $G$ is given by Matrix Tree Theorem in terms of principal minors of Laplacian matrix of $G$. We…
In this paper, we study tree--like tableaux, combinatorial objects which exhibit a natural tree structure and are connected to the partially asymmetric simple exclusion process (PASEP). There was a conjecture made on the total number of…
In the study of Ising models on large locally tree-like graphs, in both rigorous and non-rigorous methods one is often led to understanding the so-called belief propagation distributional recursions and its fixed points. We prove that there…
In a previous work, we gave a metric on the class of semibinary tree-sibling time consistent phylogenetic networks that is computable in polynomial time; in particular, the problem of deciding if two networks of this kind are isomorphic is…
Inside the discipline of graph theory exists an extension known as the hypergraph. This generalization of graphs includes vertices along with hyperedges consisting of collections of two or more vertices. One well-studied application of this…
The decision tree recursively partitions the input space into regions and derives axis-aligned decision boundaries from data. Despite its simplicity and interpretability, decision trees lack parameterized representation, which makes it…
A factor graph of a point process is a graph whose vertices are the points of the process, and which is constructed from the process in a deterministic isometry-invariant way. We prove that the d-dimensional Poisson process has a one-ended…
Following Poupard's study of strictly ordered binary trees with respect to two parameters, namely, "end of minimal chain" and "parent of maximum leaf" a true Tree Calculus is being developed to solve a partial difference equation system and…
Deciding whether a collection of unrooted trees is compatible is a fundamental problem in phylogenetics. Two different graph-theoretic characterizations of tree compatibility have recently been proposed. In one of these, tree compatibility…
Projection theorems of divergences enable us to find reverse projection of a divergence on a specific statistical model as a forward projection of the divergence on a different but rather "simpler" statistical model, which, in turn, results…
We study (plane) tree-valued Markov chains $(T_n,n \geq 1)$ with uniform backward dynamics and show that they can be obtained by sampling from a real tree. As non--plane trees, every such Markov chain is represented by a weighted real tree.…
For a zero-relation algebra over a field $\mathcal K$, Crawley-Boevey introduced the concept of a tree module and provided a combinatorial description of a basis for the space of homomorphisms between two tree modules--the basis elements…
We consider the problem of constructing optimal decision trees: given a collection of tests which can disambiguate between a set of $m$ possible diseases, each test having a cost, and the a-priori likelihood of the patient having any…
We consider fixed-point equations for probability measures charging measured compact metric spaces that naturally yield continuum random trees. On the one hand, we study the existence/uniqueness of the fixed-points and the convergence of…
A large number of explicit estimators are proposed in this paper for loss rate estimation in a network of the tree topology. All of the estimators are proved to be unbiased and consistent instead of asymptotic unbiased as that obtained in…