English
Related papers

Related papers: On a mathematical relation between the Eigen model…

200 papers

The purpose of this Note is twofold: First, we introduce the general formalism of evolutionary genetics dynamics involving fitnesses, under both the deterministic and stochastic setups, and chiefly in discrete-time. In the process, we…

Quantitative Methods · Quantitative Biology 2015-05-14 Thierry Huillet

A population genetics formulation of Eigen's molecular quasispecies model is proposed and several simple replication landscapes are investigated analytically. Our results show a remarcable similarity to those obtained with the original…

Condensed Matter · Physics 2009-10-28 Domingos Alves , Jose Fernando Fontanari

We provide an asymptotic analysis of a nonlinear integro-differential equation which describes the evolutionary dynamics of a population which reproduces sexually and which is subject to selection and competition. The sexual reproduction is…

Analysis of PDEs · Mathematics 2026-03-27 M Hillairet , S Mirrahimi

We show that the Tangled Nature model can be interpreted as a general formulation of the quasi-species model by Eigen et al. in a frequency dependent fitness landscape. We present a detailed theoretical derivation of the mutation threshold,…

Statistical Mechanics · Physics 2009-11-07 Simone Avogadro di Collobiano , Kim Christensen , Henrik Jeldtoft Jensen

The Behrens-Fisher problem is a well-known hypothesis testing problem in statistics concerning two-sample mean comparison. In this article, we confirm one conjecture in Eaton and Olshen (1972), which provides stochastic bounds for the…

Methodology · Statistics 2018-01-01 Yixuan Qiu , Lingsong Zhang

The goal of this paper is to develop a theory of graphon-valued stochastic processes, and to construct and analyse a natural class of such processes arising from population genetics. We consider finite populations where individuals change…

Probability · Mathematics 2019-08-20 Siva Athreya , Frank den Hollander , Adrian Röllin

Near the beginning of the century, Wright and Fisher devised an elegant, mathematically tractable model of gene reproduction and replacement that laid the foundation for contemporary population genetics. The Wright-Fisher model and its…

Probability · Mathematics 2013-12-23 Todd L. Parsons

We introduce a toy model for interacting populations connected by mutations and limited by a shared resource. We study the presence of Eigen's error threshold and mutational meltdown. The phase diagram of the system shows that the…

Statistical Mechanics · Physics 2007-05-23 F. Bagnoli , M. Bezzi

We provide an asymptotic analysis of a nonlinear integro-differential equation describing the evolutionary dynamics of a population which reproduces sexually and which is subject to selection and competition. The sexual reproduction is…

Analysis of PDEs · Mathematics 2023-09-19 J Guerand , M Hillairet , S Mirrahimi

The increasing availability of population-level allele frequency data across one or more related populations necessitates the development of methods that can efficiently estimate population genetics parameters, such as the strength of…

Computation · Statistics 2017-11-09 Jeffrey J. Gory , Radu Herbei , Laura S. Kubatko

The Wright-Fisher model describes a biological population containing a finite number of individuals. In this work we consider a Wright-Fisher model for a randomly mating population, where selection and mutation act at an unlinked locus. The…

Populations and Evolution · Quantitative Biology 2024-07-18 David Waxman

In this paper we introduce a multilocus diffusion model of a population of $N$ haploid, asexually reproducing individuals. The model includes parent-dependent mutation and interlocus selection, the latter limited to pairwise relationships…

Probability · Mathematics 2019-12-16 Erik Aurell , Magnus Ekeberg , Timo Koski

We show how concepts from statistical physics, such as order parameter, thermodynamic limit, and quantum phase transition, translate into biological concepts in mutation-selection models for sequence evolution and can be used there. The…

Statistical Mechanics · Physics 2007-05-23 Joachim Hermisson , Oliver Redner , Holger Wagner , Ellen Baake

We consider the classical Wright-Fisher model with mutation and selection. Mutations occur independently in each locus, and selection is performed according to the sharp peak landscape. In the asymptotic regime studied in [3], a…

Probability · Mathematics 2014-03-28 Joseba Dalmau

The Moran discrete process and the Wright-Fisher modelare the most popular models in population genetics. It is common tounderstand the dynamics of these models to use an approximating diffusionprocess, called Wright-Fisher diffusion. Here,…

Probability · Mathematics 2019-05-13 Gorgui Gackou , A Guillin , Arnaud Personne

We compare the speed with which a sexual, respectively an asexual, population is able to respond to a biased selective pressure. Our model focuses on the Weismann hypothesis that the extra variation caused by crossing-over and recombination…

Condensed Matter · Physics 2007-05-23 Kerstin Holmstrom , Henrik Jeldtoft Jensen

We study the adaptation dynamics of an initially maladapted asexual population with genotypes represented by binary sequences of length $L$. The population evolves in a maximally rugged fitness landscape with a large number of local optima.…

Populations and Evolution · Quantitative Biology 2007-05-23 Kavita Jain , Joachim Krug

We analyse a family of two-types Wright-Fisher models with selection in a random environment and skewed offspring distribution. We provide a calculable criterion to quantify the impact of different shapes of selection on the fate of the…

Probability · Mathematics 2025-02-10 Adrián González Casanova , Dario Spanò , Maite Wilke-Berenguer

Several groups have recently modeled evolutionary transitions from an ancestral allele to a beneficial allele separated by one or more intervening mutants. The beneficial allele can become fixed if a succession of intermediate mutants are…

Populations and Evolution · Quantitative Biology 2011-07-14 Stephen R Proulx

We study the asymptotic behavior of solutions of the Cauchy problem associated to a quantitative genetics model with a sexual mode of reproduction. It combines trait-dependent mortality and a nonlinear integral reproduction operator "the…

Analysis of PDEs · Mathematics 2023-08-30 Florian Patout