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Background: Human-to-human transmission of pathogens fundamentally depends on interactions among infectious and susceptible individuals, yet traditional population-scale models often overlook the stochastic, behaviour-driven, and highly…

Physics and Society · Physics 2026-04-20 Matthijs Romeijnders , Michiel van Boven , Debabrata Panja

The spreading of an infectious disease can trigger human behavior responses to the disease, which in turn plays a crucial role on the spreading of epidemic. In this study, to illustrate the impacts of the human behavioral responses, a new…

Physics and Society · Physics 2015-09-30 Can Liu , Jia-Rong Xie , Han-Shuang Chen , Hai-Feng Zhang , Ming Tang

One of the major issues in the theoretical modeling of epidemic spreading is the development of methods to control the transmission of an infectious agent. Human behavior plays a fundamental role in the spreading dynamics and can be used to…

When modelling HIV epidemics, it is important to incorporate set-point viral load and its heritability. As set-point viral load distributions can differ significantly amongst epidemics, it is imperative to account for the observed local…

Populations and Evolution · Quantitative Biology 2018-11-28 Pieter Libin , Laurens Hernalsteen , Kristof Theys , Perpetua Gomes , Ana Abecasis , Ann Nowe

Given the growth of urbanization and emerging pandemic threats, more sophisticated models are required to understand disease propagation and investigate the impacts of intervention strategies across various city types. We introduce a fully…

Physics and Society · Physics 2020-08-03 Nishant Kumar , Jimi B. Oke , Bat-hen Nahmias-Biran

In this paper, we study a simplified version of a West Nile virus model discussed by Lewis et al. [28], which was considered as a first approximation for the spatial spread of WNv. The basic reproduction number $R_0$ for the non-spatial…

Analysis of PDEs · Mathematics 2017-05-24 Abdelrazig K. Tarboush , Zhigui Lin , Mengyun Zhang

This paper describes a novel approach to modeling homphily, i.e. the tendency of nodes that share (or differ in) certain attributes to be linked; we consider dynamic networks in which nodes can be added over time but not removed. Our…

Genomics · Quantitative Biology 2022-01-13 V. DeGruttola , M. Nakazawa , J. Liu , X. Tu , S. Little , S. Mehta

In dynamic models of infectious disease transmission, typically various mixing patterns are imposed on the so-called Who-Acquires-Infection-From-Whom matrix (WAIFW). These imposed mixing patterns are based on prior knowledge of age-related…

Sensitivity Analysis (SA) is a useful tool to measure the impact of changes in model parameters on the infection dynamics, particularly to quantify the expected efficacy of disease control strategies. SA has only been applied to epidemic…

Populations and Evolution · Quantitative Biology 2021-11-23 Hayriye Gulbudak , Zhuolin Qu , Fabio Milner , Necibe Tuncer

Nowadays, the emergence of online services provides various multi-relation information to support the comprehensive understanding of the epidemic spreading process. In this Letter, we consider the edge weights to represent such multi-role…

Physics and Society · Physics 2015-06-16 Ye Sun , Chuang Liu , Chu-Xu Zhang , Zi-Ke Zhang

Mathematical models represent one of the fundamental ways of studying nature. In special, epidemic models have shown to be particularly useful in the understanding of the course of diseases and in the planning effective control policies. A…

Physics and Society · Physics 2022-10-19 Paulo C. Ventura , Eric K. Tokuda , Luciano da F. Costa , Francisco A. Rodrigues

Many progresses in the understanding of epidemic spreading models have been obtained thanks to numerous modeling efforts and analytical and numerical studies, considering host populations with very different structures and properties,…

Physics and Society · Physics 2018-02-02 Antoine Moinet , Alain Barrat , Romualdo Pastor Satorras

The time-dependent reproduction number Rt can be used to track pathogen transmission and to assess the efficacy of interventions. This quantity can be estimated by fitting renewal equation models to time series of infectious disease case…

Populations and Evolution · Quantitative Biology 2025-01-30 Ioana Bouros , Robin Thompson , David Gavaghan , Ben Lambert

We investigate a time-dependent spatial vector-host epidemic model with non-coincident domains for the vector and host populations. The host population resides in small non-overlapping sub-regions, while the vector population resides…

Analysis of PDEs · Mathematics 2018-09-12 W. E. Fitzgibbon , J. J. Morgan , Glenn F. Webb , Yixiang Wu

We present a contact-based model to study the spreading of epidemics by means of extending the dynamic message passing approach to temporal networks. The shift in perspective from node- to edge-centric quantities enables accurate modelling…

Physics and Society · Physics 2019-08-07 Andreas Koher , Hartmut H. K. Lentz , James P. Gleeson , Philipp Hövel

Federated Learning (FL) is a decentralized machine learning paradigm that enables collaborative model training across dispersed nodes without having to force individual nodes to share data. However, its broad adoption is hindered by the…

Machine Learning · Computer Science 2023-11-14 Mohammad Mahdi Rahimi , Hasnain Irshad Bhatti , Younghyun Park , Humaira Kousar , Jaekyun Moon

Connecting the different scales of epidemic dynamics, from individuals to communities to nations, remains one of the main challenges of disease modeling. Here, we revisit one of the largest public health efforts deployed against a localized…

Epidemic spreading of infectious diseases is ubiquitous and has often considerable impact on public health and economic wealth. The large variability in spatio-temporal patterns of epidemics prohibits simple interventions and demands for a…

Populations and Evolution · Quantitative Biology 2010-11-25 Christel Kamp

We propose and analyze an epidemiological model for vector borne diseases that integrates a multi-stage vector population and several host sub-populations which may be characterized by a variety of compartmental model types: subpopulations…

Populations and Evolution · Quantitative Biology 2023-06-28 Francis G. T. Kamba , Leonard C. Eze , Jean Claude Kamgang , Christopher P. Thron

This study presents a neural network-enhanced approach to modeling disease spread dynamics over time and space. Neural networks are used to estimate time-varying parameters, with two calibration methods explored: Approximate Bayesian…

Quantitative Methods · Quantitative Biology 2024-10-29 Randy L. Caga-anan