Related papers: Phylogenetic invariants for group-based models

Using the method of moving frames we analyze the algebra of differential invariants for surfaces in three-dimensional affine geometry. For elliptic, hyperbolic, and parabolic points, we show that if the algebra of differential invariants is…

In this note, we compare the dual Selmer groups of an abelian variety with that of its dual over certain large Galois field. We give formula which relates the generalized Iwasawa $\mu$-invariants associated with their dual Selmer groups…

We introduce four invariants of algebraic varieties over imperfect fields, each of which measures either geometric non-normality or geometric non-reducedness. The first objective of this article is to establish fundamental properties of…

In this work, we formally prove that, under certain conditions, if a neural network is invariant to a finite group then its weights recover the Fourier transform on that group. This provides a mathematical explanation for the emergence of…

We compute the subgroup of the monodromy group of a generalized Kummer variety associated to equivalences of derived categories of abelian surfaces. The result was previously announced in arXiv:1201.0031. Mongardi showed that the subgroup…

Null models of binary phylogenetic trees are useful for testing hypotheses on real world phylogenies. In this paper we consider phylogenies as binary trees without edge lengths together with a sampling measure and encode them as algebraic…

We introduce a notion of finite sampling consistency for phylogenetic trees and show that the set of finitely sampling consistent and exchangeable distributions on n leaf phylogenetic trees is a polytope. We use this polytope to show that…

We prove the multiple cover formula conjecture for abelian surfaces for a large class of insertions, including all stationary invariants. The proof uses the reduced degeneration formula expressing the invariants in terms of the correlated…

Let A be an abelian variety over a number field F with End(A/F) commutative. Let S be a subgroup of A(F) and let x be a point of A(F). Suppose that for almost all places v of F the reduction of x modulo v lies in the reduction of S modulo…

We consider absolutely free nonassociative algebras and, more generally, absolutely free algebras with (maybe infinitely) many multilinear operations. Such algebras are described in terms of labeled reduced planar rooted trees. This allows…

Let $q$ be a prime with $q \equiv 7 \mod 8$, and let $K=\mathbb{Q}(\sqrt{-q})$. Then $2$ splits in $K$, and we write $\mathfrak{p}$ for either of the primes $K$ above $2$. Let $K_\infty$ be the unique $\mathbb{Z}_2$-extension of $K$…

We prove that the isomorphism problem is decidable for generalized Baumslag-Solitar (GBS) groups with one quasi-conjugacy class and full support gaps. In order to do so we introduce a family of invariants that fully characterize the…

We propose a simple method to produce quandle cocycles from group cocycles, as a modification of Inoue-Kabaya chain map. We further show that, in respect to "universal central extended quandles", the chain map induces an isomorphism between…

We show that elementary abelian direct factors can be disregarded in the study of the modular isomorphism problem. Moreover, we obtain four new series of abelian invariants of the group base in the modular group algebra of a finite…

We consider the continuous-time presentation of the strand symmetric phylogenetic substitution model (in which rate parameters are unchanged under nucleotide permutations given by Watson-Crick base conjugation). Algebraic analysis of the…

The goal of this paper is to clarify the connection between certain structures from the theory of totally nonnegative Grassmannians, quiver Grassmannians for cyclic quivers and the theory of local models of Shimura varieties. More…

We examine the relationships between the differential invariants of objects and of their images under a surjective map. We analyze both the case when the underlying transformation group is projectable and hence induces an action on the…

Let $X/\mathbb{F}_{q}$ be a smooth geometrically connected variety. Inspired by work of Corlette-Simpson over $\mathbb{C}$, we formulate a conjecture that absolutely irreducible rank 2 local systems with infinite monodromy on $X$ come from…

Phylogenetic networks generalize phylogenetic trees by allowing the modelization of events of reticulate evolution. Among the different kinds of phylogenetic networks that have been proposed in the literature, the subclass of binary…

Equivariant tree models are statistical models used in the reconstruction of phylogenetic trees from genetic data. Here equivariant refers to a symmetry group imposed on the root distribution and on the transition matrices in the model. We…