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It is shown that a general two-component feedback loop can be viewed as a deformed Hamiltonian system. Some of the implications of using ideas from theoretical physics to study biological processes are discussed.

Other Quantitative Biology · Quantitative Biology 2014-12-01 David S. Tourigny

These lecture notes cover the theory of convex optimization, with a particular emphasis on first-order methods.

Optimization and Control · Mathematics 2026-05-11 Sinho Chewi

These lecture notes in the De Rham-Hodge theory are designed for a 1-semester undergraduate course (in mathematics, physics, engineering, chemistry or biology). This landmark theory of the 20th Century mathematics gives a rigorous…

Differential Geometry · Mathematics 2011-05-17 Vladimir G. Ivancevic , Tijana T. Ivancevic

A consistent guiding-center Hamiltonian theory is derived by Lie-transform perturbation method, with terms up to second order in magnetic-field nonuniformity. Consistency is demonstrated by showing that the guiding-center transformation…

Plasma Physics · Physics 2015-12-09 Natalia Tronko , Alain Brizard

The aim of these lectures is to give a short introduction to forcing. We will avoid metamathematical issues as much as possible and similarly we will avoid performing the actual construction of forcing. We assume familiarity with basic…

Logic · Mathematics 2015-03-30 Mohammad Golshani

The first two lectures are devoted to describing the basic concepts of scattering theory in a very compressed way. A detailed presentation of the abstract part can be found in \cite{I} and numerous applications in \cite{RS} and \cite{Y2}.…

Spectral Theory · Mathematics 2007-05-23 Dmitri Yafaev

Physical systems with symmetry arise abundantly in applications, and are endowed with interesting mathematical structures. The present paper focusses on linear reciprocal and input-output Hamiltonian systems. Their characterization is…

Optimization and Control · Mathematics 2025-04-07 Arjan van der Schaft , Rodolphe Sepulchre , Tom Chaffey

These lectures provide an introduction to effective theories concentrating on the basic ideas and providing some simple applications

High Energy Physics - Phenomenology · Physics 2014-11-17 Jose Wudka

In this note we survey some of our results on the Lagrangian reduction of discrete-time mechanical systems (DMSs). It is intended as an introduction to the general ideas that we used in the reduction of DMSs with nonholonomic constraints,…

Differential Geometry · Mathematics 2026-04-30 Matías I. Caruso , Javier Fernández , Cora Tori , Marcela Zuccalli

These are notes from elementary lectures given in the summer of 2013 at the YMSC center at Tsinghua University in Beijing.

Dynamical Systems · Mathematics 2016-06-01 John Erik Fornæss

Brief lecture notes for a course about random matrices given at the University of Cambridge.

Probability · Mathematics 2013-05-10 Vladislav Kargin , Elena Yudovina

Hamiltonian mechanics is an effective tool to represent many physical processes with concise yet well-generalized mathematical expressions. A well-modeled Hamiltonian makes it easy for researchers to analyze and forecast many related…

Machine Learning · Computer Science 2021-02-24 Seungjun Lee , Haesang Yang , Woojae Seong

In this paper we show how the well-know local symmetries of Lagrangeans systems, and in particular the diffeomorphism invariance, emerge in the Hamiltonian formulation. We show that only the constraints which are linear in the momenta…

High Energy Physics - Theory · Physics 2010-11-01 V. Mukhanov , A. Wipf

The way of finding all the constraints in the Hamiltonian formulation of singular (in particular, gauge) theories is called the Dirac procedure. The constraints are naturally classified according to the correspondig stages of this…

High Energy Physics - Theory · Physics 2016-11-23 D. M. Gitman , I. V. Tyutin

These lecture notes are based on a set of six lectures that I gave in Edinburgh in 2008/2009 and they cover some topics in the interface between Geometry and Physics. They involve some unsolved problems and conjectures and I hope they may…

Algebraic Geometry · Mathematics 2010-09-27 Michael Atiyah

A formulation of singular classical theories (determined by degenerate Lagrangians) without constraints is presented. A partial Hamiltonian formalism in the phase space having an initially arbitrary number of momenta (which can be smaller…

Mathematical Physics · Physics 2014-09-09 Steven Duplij

These notes contain everything necessary to run a flipped course on "The Atmosphere" at an introductory undergraduate level. There are notes for the students to read before each course meeting and problems for them to work on in small…

Earth and Planetary Astrophysics · Physics 2019-06-27 Dorian S. Abbot

We discuss the key role that Hamiltonian notions play in physics. Five examples are given that illustrate the versatility and generality of Hamiltonian notions. The given examples concern the interconnection between quantum mechanics,…

Classical Physics · Physics 2022-05-10 C. Baumgarten

We consider the problem of learning an interpretable potential energy function from a Hamiltonian system's trajectories. We address this problem for classical, separable Hamiltonian systems. Our approach first constructs a neural network…

Machine Learning · Computer Science 2019-07-30 Harish S. Bhat

The use of geometric methods has proved useful in the hamiltonian description of classical constrained systems. In this note we provide the first steps toward the description of the geometry of quantum constrained systems. We make use of…

General Relativity and Quantum Cosmology · Physics 2008-11-26 Alejandro Corichi
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