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We conducted a three-dimensional numerical simulation of bioconvection generated by oxygen-reactive chemotactic bacteria. This study investigated the bioconvection patterns, interference between plumes, and the wavelength of bioconvection…

Biological Physics · Physics 2022-12-07 Hideki Yanaoka , Tomomu Nishimura

We report a novel form of convection in suspensions of the bioluminiscent marine bacterium $Photobacterium~phosphoreum$. Suspensions of these bacteria placed in a chamber open to the air create persistent luminiscent plumes most easily…

Soft Condensed Matter · Physics 2019-01-02 Jocelyn Dunstan , Kyoung J. Lee , Simon F. Park , Yongyun Hwang , Raymond E. Goldstein

Suspensions of motile microorganisms can spontaneously form large-scale fluid motion, known as bioconvection, characterized by dense downwelling plumes separated by broad upwelling regions. In this study, we investigate bioconvection in…

Fluid Dynamics · Physics 2025-07-01 S. Gore , I. Gholami , S. O. Ahmed , T. Doskhozhina , S. V. R. Ambadipudi , A. J. Bae , A. Gholami

Bioconvection is the prototypical active matter system for hydrodynamic instabilities and pattern formation in suspensions of biased swimming microorganisms, particularly at the dilute end of the concentration spectrum where cell-cell…

Soft Condensed Matter · Physics 2025-01-22 Martin A. Bees , Prasad Perlekar

In this article, the effect of diffuse flux in the absence of direct collimated flux on the onset of phototactic bioconvection is investigated. The main effect of diffuse flux in the absence of collimated flux is on the swimming behaviour…

Dynamical Systems · Mathematics 2024-01-05 S. K. Rajput , M. K. Panda

The primary objective of this article is to explore how rotation influences the initiation of phototactic bioconvection. This investigation is conducted through the application of linear stability theory to a suspension composed of…

Soft Condensed Matter · Physics 2023-09-21 S. K. Rajput

Bioconvection is a phenomenon caused by microorganisms with tactic properties. To effectively utilize bioconvection for industrial purposes, it is necessary to find a way to control it. In this study, we performed a three-dimensional…

Fluid Dynamics · Physics 2025-05-14 Hideki Yanaoka , Daichi Koizumi

The motility of microorganisms is influenced greatly by their hydrodynamic interactions with the fluidic environment they inhabit. We show by direct experimental observation of the bi-flagellated alga Chlamydomonas reinhardtii that fluid…

Biological Physics · Physics 2015-11-03 Boyang Qin , Arvind Gopinath , Jing Yang , Jerry P Gollub , Paulo E Arratia

Bioconvection, a phenomenon arising from the collective motion of motile microorganisms, plays a crucial role in shaping microbial distributions, fluid dynamics, and bloom formation in aquatic environments. While extensive research has…

Biological Physics · Physics 2025-04-15 Samarendu Biswas , Sachidananda Mahato , Jayabrata Dhar

A chemotaxis-diffusion-convection coupling system for describing a form of buoyant convection in which the fluid develops convection cells and plume patterns will be investigated numerically in this study. Based on the two-dimensional…

Fluid Dynamics · Physics 2015-02-19 Yannick Deleuze , Chen-Yu Chiang , Marc Thiriet , Tony W. H. Sheu

Phototaxis refers to the directed swimming response influenced by the sensed light intensity in microorganisms. Positive phototaxis involves motion toward the light source, while negative phototaxis entails motion away from it. This study…

Dynamical Systems · Mathematics 2024-01-05 S. K. Rajput , M. K. Panda

The onset of light-induced bioconvection via linear stability theory is investigated qualitatively for a suspension of phototactic algae. The forward scattering algal suspension is uniformly illuminated by both diffuse and oblique…

Dynamical Systems · Mathematics 2023-03-17 M. K. Panda , S. K. Rajput

Phototaxis, the process by which living organisms navigate toward optimal light conditions, is essential for motile photosynthetic microorganisms. Positive(negative) phototaxis denotes the motion directed towards(away from) the source of…

Biological Physics · Physics 2025-07-01 A. Rathi , M. K. Panda , S. K. Rajput

The persistent motility of the individual constituents in microbial suspensions represents a prime example of so-called active matter systems. Cells consume energy, exert forces and move, overall releasing the constraints of equilibrium…

Biological Physics · Physics 2020-11-02 Armand Javadi , Jorge Arrieta , Idan Tuval , Marco Polin

We prove results on existence and uniqueness of solutions of a system of equations modeling the evolution of a generalized bioconvective flow. The mathematical model considered in the present work describes the convective motion generated…

Analysis of PDEs · Mathematics 2024-02-26 J. L. Boldrini , B. Climent-Ezquerra , M. A. Rojas-Medar , M. D. Rojas-Medar

Bacterial cellulose is an important class of biomaterials which can be grown in well-controlled laboratory and industrial conditions. The cellulose structure is affected by several biological, chemical and environmental factors, including…

Biological Physics · Physics 2021-07-28 Sung-Ha Hong , Jia Yang , Mahdi Davoodianidalik , Horst Punzmann , Michael Shats , Hua Xia

We study transport in synthetic, bi-disperse porous structures, with arrays of microchannels interconnected by a nanoporous layer. These structures are inspired by the xylem tissue in vascular plants, in which sap water travels from the…

Soft Condensed Matter · Physics 2024-07-23 Olivier Vincent , Théo Tassin , Erik J. Huber , Abraham D. Stroock

Phototaxis is the movement of microorganisms towards or away from light. In presence of dim (intense) light, microorganisms move towards (away from) the light sources, which is known as positive (negative) phototaxis. In this study, we…

Soft Condensed Matter · Physics 2023-02-23 Shubham Kumar Rajput

Microorganismal motility is often characterised by complex responses to environmental physico-chemical stimuli. Although the biological basis of these responses is often not well understood, their exploitation already promises novel avenues…

Biological Physics · Physics 2019-11-26 Jorge Arrieta , Marco Polin , Ramón Saleta-Piersanti , Idan Tuval

Many bacteria live in natural and clinical environments with abundant macromolecular polymers. Macromolecular fluids commonly display viscoelasticity and non-Newtonian rheological behavior; it is unclear how these complex-fluid properties…

Soft Condensed Matter · Physics 2024-08-27 Ding Cao , Ran Tao , Albane Théry , Song Liu , Arnold J. T. M. Mathijssen , Yilin Wu
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