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A systematic comparison was carried out to assess the influence of representative thermostat methods in constant-temperature molecular dynamics simulations. The thermostat schemes considered include the Nos\'e--Hoover thermostat and its…

Computational Physics · Physics 2026-04-24 Kumpei Shiraishi , Emi Minamitani , Kang Kim

Amontons' law states that the maximum static friction force on a solid object is proportional to the loading force and is independent of the apparent contact area. This law indicates that the static friction coefficient does not depend on…

Materials Science · Physics 2023-02-14 Wataru Iwashita , Hiroshi Matsukawa , Michio Otsuki

We investigate the propagation of the slip front in the elastic body on the rigid substrate. We first obtain the slip profile and the slip front velocity of the steady state by employing the local friction law with the quadratic form of the…

Soft Condensed Matter · Physics 2018-01-18 Takehito Suzuki , Hiroshi Matsukawa

The effect of random surface roughness on hydrodynamics of viscous incompressible liquid is discussed. Roughness-driven contributions to hydrodynamic flows, energy dissipation, and friction force are calculated in a wide range of…

Soft Condensed Matter · Physics 2009-11-07 I. V. Ponomarev , A. E. Meyerovich

We study the dynamics of particles in a multi-component 2d Lennard-Jones (LJ) fluid in the limiting case where {\it all the particles are different} (APD). The equilibrium properties of this APD system were studied in our earlier work…

Soft Condensed Matter · Physics 2016-06-22 Lenin S. Shagolsem , Yitzhak Rabin

In structural dynamics, energy dissipative mechanisms with non-viscous damping are characterized by their dependence on the time-history of the response velocity, mathematically represented by convolution integrals involving hereditary…

Dynamical Systems · Mathematics 2018-05-22 Mario Lázaro

We examine the formulation and numerical treatment of dissipative particle dynamics (DPD) and momentum-conserving molecular dynamics. We show that it is possible to improve both the accuracy and the stability of DPD by employing a pairwise…

Computational Physics · Physics 2020-02-14 Benedict Leimkuhler , Xiaocheng Shang

We present a novel method to investigate the dynamics of a single semiflexible polymer, subject to anisotropic friction in a viscous fluid. In contrast to previous approaches, we do not rely on a discrete bead-rod model, but introduce a…

Biomolecules · Quantitative Biology 2009-11-13 Tobias Munk , Oskar Hallatschek , Chris H. Wiggins , Erwin Frey

We present a numerical scheme for simulating the dynamics of Brownian particles suspended in a fluid. The motion of the particles is tracked by the Langevin equation, whereas the host fluid flow is analyzed by using the lattice Boltzmann…

Mesoscale and Nanoscale Physics · Physics 2019-10-30 Hiroaki Yoshida , Tomoyuki Kinjo , Hitoshi Washizu

Wetting and drying of a rigid substrate by a Lennard-Jones fluid in molecular dynamics simulations is reported. The size of the substrate particles, being smaller than the fluid particles in former simulations, is now taken to be equal to,…

Soft Condensed Matter · Physics 2015-06-25 C. Bruin

Accurate prediction of interfacial slip in nanoscale channels is required by many microfluidic applications. Existing hydrodynamic solutions based on Maxwellian boundary conditions include an empirical parameter that depends on material…

Soft Condensed Matter · Physics 2008-07-22 Vlad P. Sokhan , Nicholas Quirke

Molecular dynamics with the stochastic process provides a convenient way to compute structural and thermodynamic properties of chemical, biological, and materials systems. It is demonstrated that the virtual dynamics case that we proposed…

Statistical Mechanics · Physics 2018-03-20 Dezhang Li , Zifei Chen , Zhijun Zhang , Jian Liu

Molecular dynamics simulations are performed to investigate heterogeneous dynamics in amorphous glassy materials under oscillatory shear strain. We consider three-dimensional binary Lennard-Jones mixture well below the glass transition…

Soft Condensed Matter · Physics 2013-05-10 Nikolai V. Priezjev

The full kinetic dynamics of a perpendicular collisionless shock is studied by means of a one-dimensional electromagnetic full particle simulation. The present simulation domain is taken in the shock rest frame in contrast to the previous…

Plasma Physics · Physics 2015-06-26 Takayuki Umeda , Ryo Yamazaki

We argue that magnetic flux-conservation in turbulent plasmas at high magnetic Reynolds numbers neither holds in the conventional sense nor is entirely broken, but instead is valid in a novel statistical sense associated to the "spontaneous…

Plasma Physics · Physics 2013-05-29 Gregory L. Eyink

We present results of molecular dynamics simulations of the electron system on the surface of liquid helium. The simulations are done for 1600 electrons with periodic boundary conditions. Electron scattering by capillary waves and phonons…

Mesoscale and Nanoscale Physics · Physics 2018-09-03 K. Moskovtsev amd M. I. Dykman

We report on the frictional properties of thin ($\approx \mu m$) poly(dimethylacrylamide) hydrogel films within contacts with spherical silica probes. In order to focus on the contribution to friction of interfacial dissipation, a dedicated…

Soft Condensed Matter · Physics 2024-12-10 Lola Ciapa , Ludovic Olanier , Yvette Tran , Christian Frétigny , Antoine Chateauminois , Emilie Verneuil

We investigate the nature of friction in granular layers by means of numerical simulation focusing on the critical slip distance, over which the system relaxes to a new stationary state. Analyzing a transient process in which the sliding…

Geophysics · Physics 2009-10-19 Takahiro Hatano

Friction is the basic, ubiquitous mechanical interaction between two surfaces that results in resistance to motion and energy dissipation. In spite of its technological and economic significance, our ability to control friction remains…

Atomic Physics · Physics 2018-08-10 Dorian Gangloff , Alexei Bylinskii , Ian Counts , Wonho Jhe , Vladan Vuletić

The friction of a sliding plate on a thin immersed granular layer obeys Amonton-Coulomb law. We bring to the fore a large set of experimental results which indicate that, over a few decades of values, the effective dynamical…

Soft Condensed Matter · Physics 2013-10-02 Thibaut Divoux , Jean-Christophe Géminard