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Intracellular protein patterns regulate a variety of vital cellular processes such as cell division and motility, which often involve dynamic changes of cell shape. These changes in cell shape may in turn affect the dynamics of…

Pattern Formation and Solitons · Physics 2023-07-19 Laeschkir Würthner , Andriy Goychuk , Erwin Frey

Cell shape changes are largely controlled by the actin cytoskeleton, a dynamic filament network beneath the plasma membrane. Several cell types can form extended free-standing protrusions not supported by an extracellular substrate or…

Soft Condensed Matter · Physics 2025-10-21 Kristiana Mihali , Dennis Wörthmüller , Pierre Sens

Vesicle budding induced by protein binding that generates an isotropic spontaneous curvature is studied using a mean-field theory. Many spherical buds are formed via protein binding. As the binding chemical potential increases, the proteins…

Soft Condensed Matter · Physics 2021-07-30 Hiroshi Noguchi

A simple model of globular proteins which incorporates anisotropic attractions is proposed. It is closely related to models used to model simple hydrogen-bonding molecules such as water. Theories for both the fluid and solid phases are…

Soft Condensed Matter · Physics 2009-10-31 Richard P. Sear

The shape transformations of fluid membranes induced by curved protein rods are studied using meshless membrane simulations. The rod assembly at low rod density induces a flat membrane tube and oblate vesicle. It is found that the…

Soft Condensed Matter · Physics 2015-09-30 Hiroshi Noguchi

Endocytosis is an essential biological process for the trafficking of macromolecules (cargo) and membrane proteins in cells. In yeast cells, this involves the invagination of a tubular structure on the membrane and the formation of…

Soft Condensed Matter · Physics 2022-11-18 Ke Xiao , Chen-Xu Wu , Rui Ma

We consider membranes as fluid deformable surface and allow for higher order geometric terms in the bending energy. The evolution equations are derived and numerically solved using surface finite elements. The higher order geometric terms…

Soft Condensed Matter · Physics 2024-12-19 Jan Magnus Sischka , Ingo Nitschke , Axel Voigt

The spatio-temporal organization of proteins and the associated morphological changes in membranes are of importance in cell signaling. Several mechanisms that promote the aggregation of proteins at low cell surface concentrations have been…

Biological Physics · Physics 2018-04-18 K. K. Sreeja , P. B. Sunil Kumar

The disk-to-vesicle transition of a fluid membrane with no spontaneous curvature is well described by the competition between edge line and curvature energies. However, the transition of asymmetric membranes with spontaneous curvatures is…

Soft Condensed Matter · Physics 2019-09-24 Hiroshi Noguchi

Autophagy is an intracellular degradation process that employs complex membrane dynamics to isolate and break down cellular components. However, many unanswered questions remain concerning remodeling of autophagic membranes. Here, we focus…

Subcellular Processes · Quantitative Biology 2019-03-25 Jaime Agudo-Canalejo , Roland L. Knorr

The intricate shapes of biological membranes such as tubules and membrane stacks are induced by proteins. In this article, we systematically investigate the membrane shapes induced by arc-shaped scaffolds such as proteins and protein…

Subcellular Processes · Quantitative Biology 2019-05-01 Francesco Bonazzi , Thomas R. Weikl

Cell adhesion proteins typically form stable clusters that anchor the cell membrane to its environment. Several works have suggested that cell membrane protein clusters can emerge from a local feedback between the membrane curvature and the…

Soft Condensed Matter · Physics 2023-08-16 Shao-Zhen Lin , Jacques Prost , Jean-Francois Rupprecht

A common mechanism for intracellular transport is the use of controlled deformations of the membrane to create spherical or tubular buds. While the basic physical properties of homogeneous membranes are relatively well-known, the effects of…

Biological Physics · Physics 2009-11-10 Jean-Marc Allain , Cornelis Storm , Aurelien Roux , Martine Ben Amar , Jean-Francois Joanny

Solid sheets and fluid membranes exhibit buckling under lateral compression. Here, it is revealed that fluid membranes have anisotropic buckling surface tension contrary to solid sheets. Surprisingly, the surface tension perpendicular to…

Soft Condensed Matter · Physics 2011-07-01 Hiroshi Noguchi

The curvature sensitive localization of proteins on membranes is vital for many cell biological processes. Coarse-grained models are routinely employed to study the curvature sensing phenomena and membrane morphology at the length scale of…

Soft Condensed Matter · Physics 2019-10-22 T. V. Sachin Krishnan , Sovan L. Das , P. B. Sunil Kumar

We develop the elastic theory for inversion-asymmetric tethered membranes and use it to identify and study their possible phases. Asymmetry in a tethered membrane causes spontaneous curvature, which in general depends upon the local…

Statistical Mechanics · Physics 2019-06-05 Tirthankar Banerjee , Niladri Sarkar , John Toner , Abhik Basu

The interplay of membrane proteins is vital for many biological processes, such as cellular transport, cell division, and signal transduction between nerve cells. Theoretical considerations have led to the idea that the membrane itself…

Soft Condensed Matter · Physics 2016-11-28 Casper van der Wel , Afshin Vahid , Anđela Šarić , Timon Idema , Doris Heinrich , Daniela J. Kraft

We study the collective behavior of inclusions inducing local anisotropic curvatures in a flexible fluid membrane. The N-body interaction energy for general anisotropic inclusions is calculated explicitly, including multi-body interactions.…

Soft Condensed Matter · Physics 2009-10-31 P. G. Dommersnes , J. -B. Fournier

Narrow membrane tubes are commonly pulled out from the surface of phospholipid vesicles using forces applied either through laser or magnetic tweezers or through the action of processive motor proteins. Recent examples have emerged where…

Biological Physics · Physics 2019-02-27 Gaurav Kumar , N. Ramakrishnan , Anirban Sain

Fluid interfaces, such as soap films, liquid droplets or lipid membranes, are known to give rise to several special geometries, whose complexity and beauty continue to fascinate us, as observers of the natural world, and challenge us as…

Soft Condensed Matter · Physics 2012-09-26 Luca Giomi