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Node embeddings map graph vertices into low-dimensional Euclidean spaces while preserving structural information. They are central to tasks such as node classification, link prediction, and signal reconstruction. A key goal is to design…

Machine Learning · Computer Science 2026-02-18 Valentin de Bassompierre , Jean-Charles Delvenne , Laurent Jacques

We present a graph theory-based method to characterise flow defects and structural shifts in condensed matter. We explore the connection between dynamical properties, particularly the recently introduced concept of ''softness'', and…

Disordered Systems and Neural Networks · Physics 2024-08-13 An Wang , Gabriele C. Sosso

Finding the point in an algebraic variety that is closest to a given point is an optimization problem with many applications. We study the case when the variety is a Fermat hypersurface. Our formula for its Euclidean distance degree is a…

Algebraic Geometry · Mathematics 2015-10-22 Hwangrae Lee

We provide efficient constant factor approximation algorithms for the problems of finding a hierarchical clustering of a point set in any metric space, minimizing the sum of minimimum spanning tree lengths within each cluster, and in the…

Computational Geometry · Computer Science 2009-07-08 David Eppstein

Graph embeddings deal with injective maps from a given simple, undirected graph $G=(V,E)$ into a metric space, such as $\mathbb{R}^n$ with the Euclidean metric. This concept is widely studied in computer science, see \cite{ge1}, but also…

Combinatorics · Mathematics 2022-05-04 Dominic van der Zypen

Some graphs admit drawings in the Euclidean k-space in such a (natu- ral) way, that edges are represented as line segments of unit length. Such drawings will be called k dimensional unit distance representations. When two non-adjacent…

Combinatorics · Mathematics 2010-01-07 Jan Kratochvil , Boris Horvat , Tomaz Pisanski

Data clustering, the task of grouping observations according to their similarity, is a key component of unsupervised learning -- with real world applications in diverse fields such as biology, medicine, and social science. Often in these…

Machine Learning · Computer Science 2023-09-20 Anne Sophie Riis Damstrup , Sofie Tosti Madsen , Michele Coscia

We demonstrate that graphs embedded on surfaces are a powerful and practical tool to generate, characterize and simulate networks with a broad range of properties. Remarkably, the study of topologically embedded graphs is non-restrictive…

Other Condensed Matter · Physics 2015-03-19 Tomaso Aste , Ruggero Gramatica , T. Di Matteo

The distance geometry problem asks to find a realization of a given simple edge-weighted graph in a Euclidean space of given dimension K, where the edges are realized as straight segments of lengths equal (or as close as possible) to the…

Optimization and Control · Mathematics 2023-07-31 Leo Liberti , Gabriele Iommazzo , Carlile Lavor , Nelson Maculan

Discrete forms of the mean and directed curvature are constructed on piecewise flat manifolds, providing local curvature approximations for smooth manifolds embedded in both Euclidean and non-Euclidean spaces. The resulting expressions take…

Differential Geometry · Mathematics 2023-04-04 Rory Conboye

We consider unitary graphs attached to Z_d^n using an analogue of the Euclidean distance. These graphs are shown to be integral when n is odd or the dimension d is even.

Combinatorics · Mathematics 2008-07-17 Si Li , Le Anh Vinh

Many methods have been developed for data clustering, such as k-means, expectation maximization and algorithms based on graph theory. In this latter case, graphs are generally constructed by taking into account the Euclidian distance as a…

Data Analysis, Statistics and Probability · Physics 2011-01-27 Francisco A. Rodrigues , Guilherme Ferraz de Arruda , Luciano da Fontoura Costa

Clustering, as an unsupervised technique, plays a pivotal role in various data analysis applications. Among clustering algorithms, Spectral Clustering on Euclidean Spaces has been extensively studied. However, with the rapid evolution of…

Machine Learning · Computer Science 2024-12-09 Sagar Ghosh , Swagatam Das

A {\em faithful (unit) distance graph} in $\mathbb{R}^d$ is a graph whose set of vertices is a finite subset of the $d$-dimensional Euclidean space, where two vertices are adjacent if and only if the Euclidean distance between them is…

Combinatorics · Mathematics 2017-12-01 Noga Alon , Andrey Kupavskii

Generating point clouds, e.g., molecular structures, in arbitrary rotations, translations, and enumerations remains a challenging task. Meanwhile, neural networks utilizing symmetry invariant layers have been shown to be able to optimize…

Machine Learning · Computer Science 2019-11-18 Moritz Hoffmann , Frank Noé

We study the Euclidean Distance degree of algebraic neural network models from the perspective of algebraic geometry. Focusing on shallow networks with two neurons, quadratic activation, and scalar output, we identify the associated…

Algebraic Geometry · Mathematics 2026-01-01 Giacomo Graziani

In this paper we propose a new approach to detect clusters in undirected graphs with attributed vertices. We incorporate structural and attribute similarities between the vertices in an augmented graph by creating additional vertices and…

Machine Learning · Computer Science 2023-02-07 Pasqua D'Ambra , Panayot S. Vassilevski , Luisa Cutillo

Learning faithful graph representations as sets of vertex embeddings has become a fundamental intermediary step in a wide range of machine learning applications. The quality of the embeddings is usually determined by how well the geometry…

Machine Learning · Computer Science 2021-05-13 Federico López , Beatrice Pozzetti , Steve Trettel , Anna Wienhard

Let $G=(V,E)$ be a finite, connected graph. We consider a greedy selection of vertices: given a list of vertices $x_1, \dots, x_k$, take $x_{k+1}$ to be any vertex maximizing the sum of distances to the existing vertices and iterate: we…

Combinatorics · Mathematics 2022-05-06 Stefan Steinerberger

The depinning of an elastic line interacting with a quenched disorder is studied for long range interactions, applicable to crack propagation or wetting. An ultrametric distance is introduced instead of the Euclidean distance, allowing for…

Other Condensed Matter · Physics 2009-11-10 Damien Vandembroucq , Stephane Roux