Related papers: How to build a DNA search engine like Google?
In this paper we describe a new technique for the comparison of populations of DNA strands. Comparison is vital to the study of ecological systems, at both the micro and macro scales. Existing methods make use of DNA sequencing and cloning,…
DNA sequencing has faced a huge demand since it was first introduced as a service to the public. This service is often offloaded to the sequencing companies who will have access to full knowledge of individuals' sequences, a major violation…
With the progressive scale-down of semiconductor's feature size, people are looking forward to More Moore and More than Moore. In order to offer a possible alternative implementation process, people are trying to figure out a feasible…
We developed NameMyGene, a web tool and a stand alone program to easily generate putative family-based names for small RNA sequences so that laboratories can easily organize, analyze, and observe patterns from, the massive amount of data…
Modern search engines are built on a stack of different components, including query understanding, retrieval, multi-stage ranking, and question answering, among others. These components are often optimized and deployed independently. In…
Identifying similar documents within extensive volumes of data poses a significant challenge. To tackle this issue, researchers have developed a variety of effective distributed computing techniques. With the advancement of computing power…
Next-generation sequencing (NGS) technologies have enabled affordable sequencing of billions of short DNA fragments at high throughput, paving the way for population-scale genomics. Genomics data analytics at this scale requires overcoming…
With the advent of the Internet, search engines have begun sprouting like mushrooms after a rainfall. Only in recent years, have developers become more innovative, and came up with guided searching facilities online. The goals of these…
The article, after a brief introduction on genetic algorithms and their functioning, presents a kind of genetic algorithm called Viral Search. We present the key concepts, we formally derive the algorithm and we perform numerical tests…
A rapid and low-cost method to sequence DNA would usher in a revolution in medicine. We propose and theoretically show the feasibility of a protocol for sequencing based on the distributions of transverse electrical currents of…
DNA self-assembly is a robust and programmable approach for building structures at nanoscale. Researchers around the world have proposed and implemented different techniques to build two dimensional and three dimensional nano structures.…
Current techniques in sequencing a genome allow a service provider (e.g. a sequencing company) to have full access to the genome information, and thus the privacy of individuals regarding their lifetime secret is violated. In this paper, we…
DNA-based storage is an emerging technology that enables digital information to be archived in DNA molecules. This method enjoys major advantages over magnetic and optical storage solutions such as exceptional information density, enhanced…
The development of the algorithm of a neural network building by the corresponding parts of a DNA code is discussed.
Biological cells can transmit, process and receive chemically encoded data in the same way as network devices transmit, process, and receive digitally encoded data. Communication protocols have led to the rapid development of computer…
The advent of LLMs has given rise to a new type of web search: Generative search, where LLMs retrieve web pages related to a query and generate a single, coherent text as a response. This output modality stands in stark contrast to…
Neural Architecture Search (NAS) is a collection of methods to craft the way neural networks are built. Current NAS methods are far from ab initio and automatic, as they use manual backbone architectures or micro building blocks (cells),…
This paper describes a method that automatically searches Artificial Neural Networks using Cellular Genetic Algorithms. The main difference of this method for a common genetic algorithm is the use of a cellular automaton capable of…
Fast evolution of Internet technologies has led to an explosive growth of video data available in the public domain and created unprecedented challenges in the analysis, organization, management, and control of such content. The problems…
We address the task of generating query suggestions for task-based search. The current state of the art relies heavily on suggestions provided by a major search engine. In this paper, we solve the task without reliance on search engines.…