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In this paper, we focus on model reduction of biomolecular systems with multiple time-scales, modeled using the Linear Noise Approximation. Considering systems where the Linear Noise Approximation can be written in singular perturbation…

Dynamical Systems · Mathematics 2016-09-27 Narmada Herath , Domitilla Del Vecchio

In this paper, we consider a simplified model of turbulence for large Reynolds numbers driven by a constant power energy input on large scales. In the statistical stationary regime, the behaviour of the kinetic energy is characterised by…

Soft Condensed Matter · Physics 2022-02-16 Roberto Benzi , Ilaria Castaldi , Federico Toschi , Jeannot Trampert

Guided motion of emulsions is studied via combined experimental and theoretical investigations. The focus of the work is on basic issues related to driving forces generated via a step-wise (abrupt) change in wetting properties of the…

Soft Condensed Matter · Physics 2015-05-14 Fathollah Varnik , Pagra Truman , Bin Wu , Petra Uhlmann , Dierk Raabe , Manfred Stamm

The dynamics of steps on crystal surfaces is considered. In general, the meandering of the steps obeys a subdiffusive behaviour. The characteristic asymptotic time laws depend on the microscopic mechanism for detachment and attachment of…

Condensed Matter · Physics 2009-10-31 W. Selke , M. Bisani

Principle Equation of Motion (for walkers) is derived that later results in introducing two piecewise-continuous dynamical systems namely Simplified Walking Model (SWM) and Complete Walking Model (CWM) which both describe the behavior of…

Robotics · Computer Science 2019-05-07 Mostafa Ghobadi

Regularization is a core component of modern inverse problems, as it helps establish the well-posedness of the solution of interest. Popular regularization approaches include variational regularization and iterative regularization. The…

Optimization and Control · Mathematics 2025-08-08 Jie Gao , Cesare Molinari , Silvia Villa , Jingwei Liang

Hydrodynamic interactions between two identical elastic dumbbells settling under gravity in a viscous fluid at low-Reynolds-number are investigated within the point-particle model. Evolution of a benchmark initial configuration is studied,…

Fluid Dynamics · Physics 2015-06-23 Marek Bukowicki , Marta Gruca , Maria L. Ekiel-Jezewska

We study absorbing phase transitions in the one-dimensional branching annihilating random walk with long-range repulsion. The repulsion is implemented as hopping bias in such a way that a particle is more likely to hop away from its closest…

Statistical Mechanics · Physics 2023-07-26 Su-Chan Park

A non--linear diffusion equation is derived by taking into account hopping rates depending on the occupation of next neighbouring sites. There appears additonal repulsive and attractive forces leading to a changed local mobiltiy. The…

Statistical Mechanics · Physics 2009-10-31 S. Artz , M. Schulz , S. Trimper

When studying out-of-equilibrium systems, one often excites the dynamics in some degrees of freedom while removing the excitation in others through damping. In order for the system to converge to a statistical steady state, the dynamics…

Probability · Mathematics 2025-03-26 David P. Herzog , Jonathan C. Mattingly

We discuss the relaxation dynamics of a simple lattice gas model for glass-forming systems and show that with increasing density of particles this dynamics slows down very quickly. By monitoring the trajectory of tagged particles we find…

Soft Condensed Matter · Physics 2010-05-07 Pinaki Chaudhuri , Ludovic Berthier , Srikanth Sastry , Walter Kob

We consider n-dimensional deterministic flows obtained by perturbing a gradient flow. We assume that the gradient flow admits a stable curve of stationary points, and thus if the perturbation is not too large the perturbed flow also admits…

Probability · Mathematics 2013-07-05 Christophe Poquet

We report a computer-simulation study of the equilibrium phase diagram of a three-dimensional system of particles with a repulsive step potential. The phase diagram is obtained using free-energy calculations. At low temperatures, we observe…

Soft Condensed Matter · Physics 2015-05-13 N. V. Gribova , Yu. D. Fomin , Daan Frenkel , V. N. Ryzhov

In the 1960s, Lifshitz et al. predicted that quantum fluctuations can change the van der Waals (vdW) interactions from attraction to repulsion. However, the vdW repulsion, or its long-range counterpart - the Casimir repulsion, has only been…

A dynamic mitigation mechanism for instability growth was proposed and discussed in the paper [Phys. Plasmas 19, 024503 (2012)]. In the present paper the robustness of the dynamic instability mitigation mechanism is discussed further. The…

Plasma Physics · Physics 2015-06-24 S. Kawata , T. Karino

We study the effect of a constant electrical field applied on vicinal surfaces such as the Si$(111)$ surface. An electrical field parallel to the steps induces a meandering instability with a nonzero phase shift. Using the…

Materials Science · Physics 2015-06-25 Matthieu Dufay , Jean-Marc Debierre , Thomas Frisch

We study the vicinal surface with adsorption below the roughening temperature, using the restricted solid-on-solid model coupled with the Ising model. By the product-wavefunction renormalization group method, we calculate the surface…

Statistical Mechanics · Physics 2009-10-31 Noriko Akutsu , Yasuhiro Akutsu , Takao Yamamoto

In this paper, we introduce a data-driven modeling approach for dynamics problems with latent variables. The state-space of the proposed model includes artificial latent variables, in addition to observed variables that can be fitted to a…

Optimization and Control · Mathematics 2024-06-19 Yushuang Luo , Xiantao Li , Wenrui Hao

Starting from a detailed model for the kinetics of a step edge or island boundary, we derive a Gibbs-Thomson type formula and the associated step stiffness as a function of the step edge orientation angle, $theta$. Basic ingredients of the…

Materials Science · Physics 2007-09-19 Dionisios Margetis , Russel E. Caflisch

Swimming droplets are a class of active particles whose motility changes as a function of time due to shrinkage and self-avoidance of their trail. Here we combine experiments and theory to show that our non-Markovian droplet (NMD) model,…

Soft Condensed Matter · Physics 2024-05-17 Wenjun Chen , Adrien Izzet , Ruben Zakine , Eric Clément , Eric Vanden-Eijnden , Jasna Brujic
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