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Biclustering is a class of techniques that simultaneously clusters the rows and columns of a matrix to sort heterogeneous data into homogeneous blocks. Although many algorithms have been proposed to find biclusters, existing methods suffer…

Machine Learning · Statistics 2020-02-11 Michelle N. Ngo , Dustin S. Pluta , Alexander N. Ngo , Babak Shahbaba

With the rapid advances of microarray technologies, large amounts of high-dimensional gene expression data are being generated, which poses significant computational challenges. A first step towards addressing this challenge is the use of…

Computer Vision and Pattern Recognition · Computer Science 2013-02-14 P. K. Nizar Banu , H. Hannah Inbarani

Disease subtype identification (clustering) is an important problem in biomedical research. Gene expression profiles are commonly utilized to infer disease subtypes, which often lead to biologically meaningful insights into disease. Despite…

Methodology · Statistics 2016-09-27 Jiehuan Sun , Joshua L. Warren , Hongyu Zhao

Clustering is one of the main tasks in exploratory data analysis and descriptive statistics where the main objective is partitioning observations in groups. Clustering has a broad range of application in varied domains like climate,…

Databases · Computer Science 2012-03-20 Saptarsi Goswami , Amlan Chakrabarti

Clustering is a difficult and widely-studied data mining task, with many varieties of clustering algorithms proposed in the literature. Nearly all algorithms use a similarity measure such as a distance metric (e.g. Euclidean distance) to…

Neural and Evolutionary Computing · Computer Science 2019-10-24 Andrew Lensen , Bing Xue , Mengjie Zhang

Existing clustering methods are based on a single granularity of information, such as the distance and density of each data. This most fine-grained based approach is usually inefficient and susceptible to noise. Inspired by adaptive process…

Machine Learning · Computer Science 2023-03-03 Shuyin Xia , Jiang Xie , Guoyin Wang

Understanding the global organization of complicated and high dimensional data is of primary interest for many branches of applied sciences. It is typically achieved by applying dimensionality reduction techniques mapping the considered…

Computational Geometry · Computer Science 2024-11-11 Paweł Dłotko , Davide Gurnari , Mathis Hallier , Anna Jurek-Loughrey

Clustering large amount of data is becoming increasingly important in the current times. Due to the large sizes of data, clustering algorithm often take too much time. Sampling this data before clustering is commonly used to reduce this…

Machine Learning · Computer Science 2021-08-24 Seemandhar Jain , Aditya A. Shastri , Kapil Ahuja , Yann Busnel , Navneet Pratap Singh

One of the most widely used techniques for data clustering is agglomerative clustering. Such algorithms have been long used across many different fields ranging from computational biology to social sciences to computer vision in part…

Machine Learning · Computer Science 2014-07-15 Maria-Florina Balcan , Yingyu Liang , Pramod Gupta

Finite mixture models have become a popular tool for clustering. Amongst other uses, they have been applied for clustering longitudinal data and clustering high-dimensional data. In the latter case, a latent Gaussian mixture model is…

Methodology · Statistics 2018-04-17 Vanessa S. E. Bierling , Paul D. McNicholas

Most of the research on clustering ensemble focuses on designing practical consistency learning algorithms.To solve the problems that the quality of base clusters varies and the low-quality base clusters have an impact on the performance of…

Machine Learning · Computer Science 2024-11-04 Jianwen Gan , Yan Chen , Peng Zhou , Liang Du

K-means clustering is a cornerstone of data mining, but its efficiency deteriorates when confronted with massive datasets. To address this limitation, we propose a novel heuristic algorithm that leverages the Variable Neighborhood Search…

Machine Learning · Computer Science 2024-10-21 Ravil Mussabayev , Rustam Mussabayev

In recent years there has been a growing interest in the role of networks and clusters in the global economy. Despite being a popular research topic in economics, sociology and urban studies, geographical clustering of human activity has…

Physics and Society · Physics 2015-05-19 Roberto Catini , Dmytro Karamshuk , Orion Penner , Massimo Riccaboni

The community structure of complex networks reveals both their organization and hidden relationships among their constituents. Most community detection methods currently available are not deterministic, and their results typically depend on…

Physics and Society · Physics 2012-03-29 Andrea Lancichinetti , Santo Fortunato

This paper describes a method for clustering data that are spread out over large regions and which dimensions are on different scales of measurement. Such an algorithm was developed to implement a robotics application consisting in sorting…

Machine Learning · Computer Science 2017-03-23 Joris Guérin , Olivier Gibaru , Stéphane Thiery , Eric Nyiri

We review clustering as an analysis tool and the underlying concepts from an introductory perspective. What is clustering and how can clusterings be realised programmatically? How can data be represented and prepared for a clustering task?…

Machine Learning · Computer Science 2022-12-05 Jan-Oliver Felix Kapp-Joswig , Bettina G. Keller

Data clustering is a technique for clustering set of objects into known number of groups. Several approaches are widely applied to data clustering so that objects within the clusters are similar and objects in different clusters are far…

Machine Learning · Computer Science 2015-05-14 R. Jensi , G. Wiselin Jiji

Clustering categorical data is an integral part of data mining and has attracted much attention recently. In this paper, we present k-ANMI, a new efficient algorithm for clustering categorical data. The k-ANMI algorithm works in a way that…

Artificial Intelligence · Computer Science 2007-05-23 Zengyou He , Xiaofei Xu , Shengchun Deng

Biclustering algorithms play a central role in the biotechnological and biomedical domains. The knowledge extracted supports the extraction of putative regulatory modules, essential to understanding diseases, aiding therapy research, and…

Databases · Computer Science 2022-12-13 Leonardo Alexandre , Rafael S. Costa , Rui Henriques

The classical k-means clustering, based on distances computed from all data features, cannot be directly applied to incomplete data with missing values. A natural extension of k-means to missing data, namely k-POD, uses only the observed…

Methodology · Statistics 2025-07-17 Xin Guan , Yoshikazu Terada