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Under the effect of strong genetic drift, it is highly probable to observe gene fixation or gene loss in a population, shown by infinite peaks on a coherently constructed potential energy landscape. It is then important to ask what such…

Populations and Evolution · Quantitative Biology 2015-06-15 Song Xu , Shuyun Jiao , Pengyao Jiang , Ping Ao

A model of the dynamics of natural rotifer populations is described as a discrete nonlinear map depending on three parameters, which reflect characteristics of the population and environment. Model dynamics and their change by variation of…

Subcellular Processes · Quantitative Biology 2007-05-23 Faina S. Berezovskaya , Georgy P. Karev , Terry W. Snell

Spatially explicit models have been widely used in today's mathematical ecology and epidemiology to study persistence and extinction of populations as well as their spatial patterns. Here we extend the earlier work--static dispersal between…

Populations and Evolution · Quantitative Biology 2009-07-01 Quan-Xing Liu , Rong-Hua Wang , Zhen Jin

We deal with stochastic network simulations in a model with three distinct species that compete under cyclic rules which are similar to the rules of the popular rock-paper-scissors game. We investigate the Hamming distance density and then…

Biological Physics · Physics 2019-04-18 M. Mugnaine , F. M. Andrade , J. D. Szezech, , D. Bazeia

Twenty years ago, after analysing palaeontological data, Raup and Sepkoski suggested that mass extinctions on Earth appear cyclically in time with a period of approximately 26 million years (My). To explain the 26My period, a number of…

Populations and Evolution · Quantitative Biology 2007-05-23 Adam Lipowski , Dorota Lipowska

The formation of out-of-equilibrium patterns is a characteristic feature of spatially-extended, biodiverse, ecological systems. Intriguing examples are provided by cyclic competition of species, as metaphorically described by the…

Populations and Evolution · Quantitative Biology 2008-08-31 Tobias Reichenbach , Mauro Mobilia , Erwin Frey

In this letter we consider a single parameter generalization of the standard three species Rock-Paper-Scissors (RPS) model allowing for predator-prey reversal. This model, which shall be referred to as $\kappa$RPS model, incorporates…

Populations and Evolution · Quantitative Biology 2023-05-31 P. P. Avelino , B. F. de Oliveira , R. S. Trintin

Frequency dependent selection and demographic fluctuations play important roles in evolutionary and ecological processes. Under frequency dependent selection, the average fitness of the population may increase or decrease based on…

Populations and Evolution · Quantitative Biology 2015-06-23 Weini Huang , Christoph Hauert , Arne Traulsen

Antipredator behavior is present in many biological systems where individuals collectively react to an imminent attack. The antipredator response may influence spatial pattern formation and ecosystem stability but requires an organism's…

Populations and Evolution · Quantitative Biology 2021-11-10 J. Menezes , B. Moura

We study the biodiversity problem for resource competition systems with extinctions and self-limitation effects. Our main result establishes estimates of biodiversity in terms of the fundamental parameters of the model. We also prove the…

Dynamical Systems · Mathematics 2018-09-12 Vladimir Kozlov , Sergey Vakulenko , Uno Wennergren , Vladimir G. Tkachev

The Jungle Game is used in population dynamics to describe cyclic competition among species that interact via a food chain. The dynamics of the Jungle Game supports a heteroclinic network whose cycles represent coexisting species. The…

Dynamical Systems · Mathematics 2024-01-17 Sofia B. S. D. Castro , Ana M. J. Ferreira , Isabel S. Labouriau

Introducing the effect of extinction into the so-called replicator equations in mathematical biology, we construct a general model of ecosystems. The present model shows mass extinction by its own extinction dynamics when the system…

adap-org · Physics 2008-02-03 Kei Tokita , Ayumu Yasutomi

Understanding the conditions ensuring the persistence of a population is an issue of primary importance in population biology. The first theoretical approach to the problem dates back to the 50's with the KiSS (after Kierstead, Slobodkin…

Populations and Evolution · Quantitative Biology 2015-09-07 Stefano Berti , Massimo Cencini , Davide Vergni , Angelo Vulpiani

Methods for predicting the probability and timing of a species' extinction are typically based on a combination of theoretical models and empirical data, and focus on single species population dynamics. Of course, species also interact with…

Populations and Evolution · Quantitative Biology 2012-06-11 Gian Marco Palamara , Gustav W. Delius , Matthew J. Smith , Owen L. Petchey

We study a mechanistic mathematical model of extinction and coexistence in a generic hunter-prey ecosystem. The model represents typical scenarios of human invasion and environmental change, characteristic of the late Pleistocene,…

Populations and Evolution · Quantitative Biology 2016-08-08 Guillermo Abramson , María F. Laguna , Marcelo N. Kuperman , Adrián Monjeau , José L. Lanata

Cyclic (rock-paper-scissors-type) population models serve to mimic complex species interactions. Focusing on a paradigmatic three-species model with mutations in one dimension, we observe an interplay between equilibrium and non-equilibrium…

Statistical Mechanics · Physics 2010-07-07 Anton A. Winkler , Tobias Reichenbach , Erwin Frey

If rock beats scissors and scissors beat paper, one might assume that rock beats paper too. But this is not the case for intransitive relationships that make up the famous rock-paper-scissors game. However, the sole presence of paper might…

Physics and Society · Physics 2015-11-18 Attila Szolnoki , Matjaz Perc

Issues in co-evolutionary population dynamics have long been studied via computationally intensive simulations of minimally simple agent-based models, known as Evolutionary Spatial Cyclic Games (ESCGs), involving multiple interacting…

Populations and Evolution · Quantitative Biology 2024-10-07 Dave Cliff

Stochastic discrete-time SIS and SIR models of endemic diseases are introduced and analyzed. For the deterministic, mean-field model, the basic reproductive number $R_0$ determines their global dynamics. If $R_0\le 1$, then the frequency of…

Populations and Evolution · Quantitative Biology 2020-05-19 Sebastian J. Schreiber , Shuo Huang , Jifa Jiang , Hao Wang

Rock-paper-scissors (RPS) game is a nice model to study the biodiversity in ecosystem. However, the previous studies only consider the nearest- neighbor- interaction among the species. In this paper, taking the long range migration into…

Biological Physics · Physics 2012-02-15 Dong Wang , Qian Zhuang , Jing Zhang , Zengru Di
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