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Related papers: Detecting Motifs in System Call Sequences

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Due to the complexity of modern computer systems, novel and unexpected behaviors frequently occur. Such deviations are either normal occurrences, such as software updates and new user activities, or abnormalities, such as misconfigurations,…

Machine Learning · Computer Science 2023-09-06 Quentin Fournier , Daniel Aloise , Leandro R. Costa

This article introduces idMotif, a visual analytics framework designed to aid domain experts in the identification of motifs within protein sequences. Motifs, short sequences of amino acids, are critical for understanding the distinct…

Quantitative Methods · Quantitative Biology 2024-02-12 Ji Hwan Park , Vikash Prasad , Sydney Newsom , Fares Najar , Rakhi Rajan

Studying the topology of so-called real networks, that is networks obtained from sociological or biological data for instance, has become a major field of interest in the last decade. One way to deal with it is to consider that networks are…

Applications · Statistics 2010-07-27 Etienne Birmele

Motif discovery is a fundamental step in data mining tasks for time-series data such as clustering, classification and anomaly detection. Even though many papers have addressed the problem of how to find motifs in time-series by proposing…

Machine Learning · Computer Science 2020-04-20 Maria Inês Silva , Roberto Henriques

The discovery of motifs underlying gene expression is a challenging one. Some of these motifs are known transcription factors, but sequence inspection often provides valuable clues, even discovery of novel motifs with uncharacterized…

Genomics · Quantitative Biology 2007-05-23 Arvind Rao , Alfred O. Hero , David J. States , James Douglas Engel

The mining of graphs in terms of their local substructure is a well-established methodology to analyze networks. It was hypothesized that motifs - subgraph patterns which appear significantly more often than expected at random - play a key…

Social and Information Networks · Computer Science 2015-01-16 Marco Winkler , Joerg Reichardt

Physical and functional constraints on biological networks lead to complex topological patterns across multiple scales in their organization. A particular type of higher-order network feature that has received considerable interest is…

Quantitative Methods · Quantitative Biology 2024-10-15 Alexis Bénichou , Jean-Baptiste Masson , Christian L. Vestergaard

One of the most important concepts in biological network analysis is that of network motifs, which are patterns of interconnections that occur in a given network at a frequency higher than expected in a random network. In this work we are…

Discrete Mathematics · Computer Science 2020-05-29 Diego P Rubert , Eloi Araujo , Marco A Stefanes , Jens Stoye , Fábio V Martinez

Process mining has emerged as a way to analyze the behavior of an organization by extracting knowledge from event logs and by offering techniques to discover, monitor and enhance real processes. In the discovery of process models,…

Artificial Intelligence · Computer Science 2017-10-17 David Chapela-Campa , Manuel Mucientes , Manuel Lama

Temporal graphs serve as a critical foundation for modeling evolving interactions in domains ranging from financial networks to social media. Mining temporal motifs is essential for applications such as fraud detection, cybersecurity, and…

Databases · Computer Science 2025-07-22 Sanjay Sri Vallabh Singapuram , Ronald Dreslinski , Nishil Talati

Motifs are non-commonplace, recurring narrative elements, often found originally in folk stories. In addition to being of interest to folklorists, motifs appear as metaphoric devices in modern news, literature, propaganda, and other…

Computation and Language · Computer Science 2026-03-23 Ibrahim H. Alyami , Mark A. Finlayson

Several natural and theoretical networks can be broken down into smaller portions, or subgraphs corresponding to neighborhoods. The more frequent of these neighborhoods can then be understood as motifs of the network, being therefore…

Physics and Society · Physics 2022-04-21 Guilherme S. Domingues , Eric K. Tokuda , Luciano da F. Costa

The widespread application of Large Language Models (LLMs) has motivated a growing interest in their capacity for processing dynamic graphs. Temporal motifs, as an elementary unit and important local property of dynamic graphs which can…

Machine Learning · Computer Science 2026-03-09 Bing Hao , Minglai Shao , Zengyi Wo , Yunlong Chu , Yuhang Liu , Ruijie Wang

The structure of complex networks can be characterized by counting and analyzing network motifs. Motifs are small subgraphs that occur repeatedly in a network, such as triangles or chains. Recent work has generalized motifs to temporal and…

Physics and Society · Physics 2022-01-04 Timothy LaRock , Ingo Scholtes , Tina Eliassi-Rad

Recently, interest has grown in exploring the hypothesis that neural activity conveys information through precise spiking motifs. To investigate this phenomenon, various algorithms have been proposed to detect such motifs in Single Unit…

Neurons and Cognition · Quantitative Biology 2023-09-27 Laurent U Perrinet

Investigating the frequency and distribution of small subgraphs with a few nodes/edges, i.e., motifs, is an effective analysis method for static networks. Motif-driven analysis is also useful for temporal networks where the spectrum of…

Social and Information Networks · Computer Science 2021-05-04 Penghang Liu , Valerio Guarrasi , A. Erdem Sarıyüce

Until two decades ago, industrial networks were deemed secure due to physical separation from public networks. An abundance of successful attacks proved that assumption wrong. Intrusion detection solutions for industrial application need to…

Cryptography and Security · Computer Science 2019-07-10 Simon D. Duque Anton , Daniel Fraunholz , Hans Dieter Schotten

Network motifs are recurrent, small-scale patterns of interactions observed frequently in a system. They shed light on the interplay between the topology and the dynamics of complex networks across various domains. In this work, we focus on…

Social and Information Networks · Computer Science 2023-11-08 Quintino Francesco Lotito , Federico Musciotto , Federico Battiston , Alberto Montresor

We introduce a methodology for efficient monitoring of processes running on hosts in a corporate network. The methodology is based on collecting streams of system calls produced by all or selected processes on the hosts, and sending them…

Cryptography and Security · Computer Science 2017-07-14 Michael Dymshits , Ben Myara , David Tolpin

Motivation: Genome and Proteome Alignments, represented by the Multiple Alignment File (MAF) format, have become a standard approach in the field of comparative genomics and proteomics. However, current approaches lack a direct method for…