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Discrete dynamic models are a powerful tool for the understanding and modeling of large biological networks. Although a lot of progress has been made in developing analysis tools for these models, there is still a need to find approaches…

Molecular Networks · Quantitative Biology 2013-06-14 Jorge G. T. Zañudo , Réka Albert

We introduce Tiered Sampling, a novel technique for approximate counting sparse motifs in massive graphs whose edges are observed in a stream. Our technique requires only a single pass on the data and uses a memory of fixed size $M$, which…

Data Structures and Algorithms · Computer Science 2017-10-06 Lorenzo De Stefani , Erisa Terolli , Eli Upfal

In this paper we introduce a new data-driven run-time monitoring system for analysing the behaviour of time evolving complex systems. The monitor controls the evolution of the whole system but it is mined from the data produced by its…

Logic in Computer Science · Computer Science 2019-08-12 Matteo Rucco , Luca Tesei , Emanuela Merelli

Audit logs containing system level events are frequently used for behavior modeling as they can provide detailed insight into cyber-threat occurrences. However, mapping low-level system events in audit logs to highlevel behaviors has been a…

Cryptography and Security · Computer Science 2023-12-14 Mohammad Mamun , Scott Buffett

Understanding the structure of interaction processes helps us to improve information-seeking dialogue systems. Analyzing an interaction process boils down to discovering patterns in sequences of alternating utterances exchanged between a…

Information Retrieval · Computer Science 2018-12-31 Svitlana Vakulenko , Kate Revoredo , Claudio Di Ciccio , Maarten de Rijke

Motif discovery is a core problem in computational biology, traditionally formulated as a likelihood optimization task that returns a single dominant motif from a DNA sequence dataset. However, regulatory sequence data admit multiple…

Neural and Evolutionary Computing · Computer Science 2026-04-21 Alejandro Medina , Mary Lauren Benton

How to make a good trade-off between performance and computational cost is crucial for a tracker. However, current famous methods typically focus on complicated and time-consuming learning that combining temporal and appearance information…

Computer Vision and Pattern Recognition · Computer Science 2024-12-19 Jinxia Xie , Bineng Zhong , Qihua Liang , Ning Li , Zhiyi Mo , Shuxiang Song

This work is done as part of a master's thesis project. The increase in the volume of data has given rise to various issues related to the collection, storage, analysis and exploitation of these data in order to create an added value. In…

Machine Learning · Computer Science 2019-06-12 Ons Khemiri

In modern IT systems and computer networks, real-time and offline event log analysis is a crucial part of cyber security monitoring. In particular, event log analysis techniques are essential for the timely detection of cyber attacks and…

Cryptography and Security · Computer Science 2025-04-15 Risto Vaarandi , Hayretdin Bahsi

Data mining is the task of discovering interesting patterns from large amounts of data. There are many data mining tasks, such as classification, clustering, association rule mining, and sequential pattern mining. Sequential pattern mining…

Databases · Computer Science 2010-02-08 Mahdi Esmaeili , Fazekas Gabor

Various and ubiquitous information systems are being used in monitoring, exchanging, and collecting information. These systems are generating massive amount of event sequence logs that may help us understand underlying phenomenon. By…

Machine Learning · Statistics 2018-07-13 Yihuang Kang , Vladimir Zadorozhny

Design patterns are elegant and well-tested solutions to recurrent software development problems. They are the result of software developers dealing with problems that frequently occur, solving them in the same or a slightly adapted way. A…

Software Engineering · Computer Science 2019-03-25 Hannes Thaller , Lukas Linsbauer , Alexander Egyed

Finding dense subnetworks, with density based on edges or more complex structures, such as subgraphs or $k$-cliques, is a fundamental algorithmic problem with many applications. While the problem has been studied extensively in static…

Data Structures and Algorithms · Computer Science 2024-06-26 Ilie Sarpe , Fabio Vandin , Aristides Gionis

This paper addresses the problem of data-driven model discrimination for unknown switched systems with unknown linear temporal logic (LTL) specifications, representing tasks, that govern their mode sequences, where only sampled data of the…

Artificial Intelligence · Computer Science 2023-06-19 Zeyuan Jin , Nasim Baharisangari , Zhe Xu , Sze Zheng Yong

Subsequence-based time series classification algorithms provide accurate and interpretable models, but training these models is extremely computation intensive. The asymptotic time complexity of subsequence-based algorithms remains a…

Machine Learning · Computer Science 2021-02-18 Atif Raza , Stefan Kramer

Engine assembly is a complex and heavily automated distributed-control process, with large amounts of faults data logged everyday. We describe an application of temporal data mining for analyzing fault logs in an engine assembly plant.…

Machine Learning · Computer Science 2009-04-30 Srivatsan Laxman , Basel Shadid , P. S. Sastry , K. P. Unnikrishnan

Chain-of-Thought (CoT) monitoring has emerged as a compelling method for detecting harmful behaviors such as reward hacking for reasoning models, under the assumption that models' reasoning processes are informative of such behaviors. In…

Machine Learning · Computer Science 2026-03-10 Nikolaus Howe , Micah Carroll

Process mining techniques can help organizations to improve their operational processes. Organizations can benefit from process mining techniques in finding and amending the root causes of performance or compliance problems. Considering the…

Machine Learning · Computer Science 2021-08-18 Mahnaz Sadat Qafari , Wil van der Aalst

Advanced persistent threats (APT) are stealthy cyber-attacks that are aimed at stealing valuable information from target organizations and tend to extend in time. Blocking all APTs is impossible, security experts caution, hence the…

Cryptography and Security · Computer Science 2021-05-24 Sidahmed Benabderrahmane , Ghita Berrada , James Cheney , Petko Valtchev

A determinant property of the structure of a biological network is the distribution of local connectivity patterns, i.e., network motifs. In this work, a method for creating directed, unweighted networks while promoting a certain…

Social and Information Networks · Computer Science 2016-07-29 Tuomo Mäki-Marttunen
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