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We present a framework facilitating the implementation and comparison of text compression algorithms. We evaluate its features by a case study on two novel compression algorithms based on the Lempel-Ziv compression schemes that perform well…

Data Structures and Algorithms · Computer Science 2021-04-23 Patrick Dinklage , Johannes Fischer , Dominik Köppl , Marvin Löbel , Kunihiko Sadakane

We propose algorithms that, given the input string of length $n$ over integer alphabet of size $\sigma$, construct the Burrows-Wheeler transform (BWT), the permuted longest-common-prefix (PLCP) array, and the LZ77 parsing in…

Data Structures and Algorithms · Computer Science 2020-12-09 Dominik Kempa

The suffix array is an efficient data structure for in-memory pattern search. Suffix arrays can also be used for external-memory pattern search, via two-level structures that use an internal index to identify the correct block of suffix…

Data Structures and Algorithms · Computer Science 2013-03-27 Simon Gog , Alistair Moffat , J. Shane Culpepper , Andrew Turpin , Anthony Wirth

Sublinear time quantum algorithms have been established for many fundamental problems on strings. This work demonstrates that new, faster quantum algorithms can be designed when the string is highly compressible. We focus on two popular and…

Data Structures and Algorithms · Computer Science 2023-02-15 Daniel Gibney , Sharma V. Thankachan

Based on the Breslauer-Italiano online suffix tree construction algorithm (2013) with double logarithmic worst-case guarantees on the update time per letter, we develop near-real-time algorithms for several classical problems on strings,…

Data Structures and Algorithms · Computer Science 2026-02-18 Dominik Köppl , Gregory Kucherov

A suffix tree is able to efficiently locate a pattern in an indexed string, but not in general the most recent copy of the pattern in an online stream, which is desirable in some applications. We study the most general version of the…

Data Structures and Algorithms · Computer Science 2014-07-15 N. Jesper Larsson

The pressing need for eficient compression schemes for XML documents has recently been focused on stack computation [6, 9], and in particular calls for a formulation of information-lossless stack or pushdown compressors that allows a formal…

Information Theory · Computer Science 2007-09-17 Pilar Albert , Elvira Mayordomo , Philippe Moser , Sylvain Perifel

Advances in DNA sequencing technology will soon result in databases of thousands of genomes. Within a species, individuals' genomes are almost exact copies of each other; e.g., any two human genomes are 99.9% the same. Relative Lempel-Ziv…

Data Structures and Algorithms · Computer Science 2011-11-08 Travis Gagie , Juha Kärkkäinen , Yakov Nekrich , Simon J. Puglisi

We present an algorithm that computes the Lempel-Ziv decomposition in $O(n(\log\sigma + \log\log n))$ time and $n\log\sigma + \epsilon n$ bits of space, where $\epsilon$ is a constant rational parameter, $n$ is the length of the input…

Data Structures and Algorithms · Computer Science 2015-06-09 Dmitry Kosolobov

Data compression has been widely applied in many data processing areas. Compression methods use variable-size codes with the shorter codes assigned to symbols or groups of symbols that appear in the data frequently. Fibonacci coding, as a…

Performance · Computer Science 2007-12-19 R. Baca , V. Snasel , J. Platos , M. Kratky , E. El-Qawasmeh

In-context learning has established itself as an important learning paradigm for Large Language Models (LLMs). In this paper, we demonstrate that LLMs can learn encoding keys in-context and perform analysis directly on encoded…

Computation and Language · Computer Science 2026-04-16 Andresa Rodrigues de Campos , David Lee , Imry Kissos , Piyush Paritosh

We prove that longest common prefix (LCP) information can be stored in much less space than previously known. More precisely, we show that in the presence of the text and the suffix array, o(n) additional bits are sufficient to answer…

Data Structures and Algorithms · Computer Science 2010-02-19 Johannes Fischer

Speculative decoding (SD) has been demonstrated as an effective technique for lossless LLM inference acceleration. Retrieval-based SD methods, one kind of model-free method, have yielded promising speedup, but they often rely on incomplete…

Computation and Language · Computer Science 2024-12-17 Yuxuan Hu , Ke Wang , Xiaokang Zhang , Fanjin Zhang , Cuiping Li , Hong Chen , Jing Zhang

This paper presents conditional versions of Lempel-Ziv (LZ) algorithm for settings where compressor and decompressor have access to the same side information. We propose a fixed-length-parsing LZ algorithm with side information, motivated…

Information Theory · Computer Science 2017-07-19 Yeohee Im , Sergio Verdú

We introduce Lexico, a novel KV cache compression method that leverages sparse coding with a universal dictionary. Our key finding is that key-value cache in modern LLMs can be accurately approximated using sparse linear combination from a…

Machine Learning · Computer Science 2024-12-13 Junhyuck Kim , Jongho Park , Jaewoong Cho , Dimitris Papailiopoulos

Data compression continues to evolve, with traditional information theory methods being widely used for compressing text, images, and videos. Recently, there has been growing interest in leveraging Generative AI for predictive compression…

Information Theory · Computer Science 2024-09-24 Swathi Shree Narashiman , Nitin Chandrachoodan

We consider the communication complexity of the Hamming distance of two strings. Bille et al. [SPIRE 2018] considered the communication complexity of the longest common prefix (LCP) problem in the setting where the two parties have their…

Data Structures and Algorithms · Computer Science 2021-04-02 Shiori Mitsuya , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

LZ77-based compression schemes compress the input text by replacing factors in the text with an encoded reference to a previous occurrence formed by the couple (length, offset). For a given factor, the smallest is the offset, the smallest…

Data Structures and Algorithms · Computer Science 2012-11-22 Maxime Crochemore , Alessio Langiu , Filippo Mignosi

The paper proposes an improved error-resilient Lempel-Ziv'77 (LZ'77) algorithm employing an adaptive amount of parity bits for error protection. It is a modified version of error resilient algorithm LZRS'77, proposed recently, which uses a…

Information Theory · Computer Science 2008-04-21 Tomaz Korosec , Saso Tomazic

The longest common prefix array is a very advantageous data structure that, combined with the suffix array and the Burrows-Wheeler transform, allows to efficiently compute some combinatorial properties of a string useful in several…

Data Structures and Algorithms · Computer Science 2016-05-16 Anthony J. Cox , Fabio Garofalo , Giovanna Rosone , Marinella Sciortino
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