English
Related papers

Related papers: Fluctuation relations for molecular motors

200 papers

We prove the Gallavotti-Cohen fluctuation theorem for a model of heat conduction through a chain of anharmonic oscillators coupled to two Hamiltonian reservoirs at different temperatures.

Mathematical Physics · Physics 2015-06-26 Luc Rey-Bellet , Lawrence E. Thomas

Biological machines like molecular motors and enzymes operate in dynamic cycles representable as stochastic flows on networks. Current stochastic dynamics describes such flows on fixed networks. Here, we develop a scalable approach to…

Statistical Mechanics · Physics 2026-03-02 Ying-Jen Yang , Ken A. Dill

A Brownian Motor is a nanoscale or molecular device that combines the effects of thermal noise, spatial or temporal asymmetry, and directionless input energy to drive directed motion. Because of the input energy, Brownian motors function…

Statistical Mechanics · Physics 2009-11-13 R. Dean Astumian

We present a new class of fluctuation relations, to which we will refer as Fluctuation Relations for Current Components (FRCCs). FRCCs can be used to estimate system parameters when complete information about nonequilibrium many-body…

Mesoscale and Nanoscale Physics · Physics 2015-05-30 Sriram Ganeshan , N. A. Sinitsyn

It has recently been pointed out that Hamiltonian particle systems in constant magnetic fields satisfy generalized time-reversal symmetries that enable to prove useful statistical relationships based on equilibrium phase-space probability…

Statistical Mechanics · Physics 2021-02-24 Alessandro Coretti , Lamberto Rondoni , Sara Bonella

It is rigorously shown that the fluctuation formula, which is used in simulations to calculate the dielectric constant of interaction site models, corresponds to the reaction field with an individual site cut-off rather than with the usual…

Computational Physics · Physics 2009-10-31 Igor P. Omelyan

We present a theoretical framework to understand a modified fluctuation-dissipation theorem valid for systems close to non-equilibrium steady-states and obeying markovian dynamics. We discuss the interpretation of this result in terms of…

Statistical Mechanics · Physics 2015-05-20 G. Verley , K. Mallick , D. Lacoste

With reference to the experimental observations by T. Yanagida and his co-workers on actomyosin interaction, a Brownian motor of fluctuating ratchet kind is designed with the aim to describe the interaction between a Myosin II head and a…

Statistical Mechanics · Physics 2007-05-23 T. Shimokawa , S. Sato , A. Buonocore , L. M. Ricciardi

We study the stochastic energetic exchanges in quantum heat engines. Due to microreversibility, these obey a fluctuation relation, called the heat engine fluctuation relation, which implies the Carnot bound: no machine can have an…

Quantum Physics · Physics 2015-03-24 Michele Campisi , Jukka Pekola , Rosario Fazio

Fluctuating-charge models are computationally efficient methods of treating polarization and charge-transfer phenomena in molecular mechanics and classical molecular dynamics simulations. They are also theoretically appealing as they are…

Chemical Physics · Physics 2010-04-02 Jiahao Chen

The non-equilibrium fluctuations of power flux in a fluidized granular media have been recently measured in an experiment [Phys. Rev. Lett. 92, 164301, 2004], which was announced to be a verification of the Fluctuation Relation (FR) by…

Statistical Mechanics · Physics 2007-05-23 A. Puglisi , P. Visco , A. Barrat , E. Trizac , F. van Wijland

We study current fluctuations in lattice gases in the macroscopic limit extending the dynamic approach for density fluctuations developed in previous articles. More precisely, we establish a large deviation principle for a space-time…

Statistical Mechanics · Physics 2015-12-18 L. Bertini , A. De Sole , D. Gabrielli , G. Jona-Lasinio , C. Landim

We consider a randomly flashing ratchet, where the potential acting can be switched to another at random. Using coupled Fokker-Planck equations, we formulate the expressions of quantities measuring dynamics and thermodynamics. Extended…

Statistical Mechanics · Physics 2021-05-07 Xining Xu , Yunxin Zhang

In this review, we systematically examine the principles and the practices of fluctuations such as the momentum and the charge fluctuations as applied to the heavy ion collisions. Main emphases are: (i) Fluctuations as signals of phase…

High Energy Physics - Phenomenology · Physics 2007-05-23 Sangyong Jeon , Volker Koch

We introduce a framework to identify Fluctuation Relations for vector-valued observables in physical systems evolving through a stochastic dynamics. These relations arise from the particular structure of a suitable entropic functional and…

Statistical Mechanics · Physics 2025-10-22 Raphael Chetrite , Stefano Marcantoni

The Gallavotti - Cohen Fluctuation Theorem (FT) implies an infinite set of identities between correlation functions that can be seen as a generalization of Green Kubo formula to the nonlinear regime. As an application, we discuss a…

Statistical Mechanics · Physics 2015-05-14 Marcello Porta

Unlike macroscopic engines, the molecular machinery of living cells is strongly affected by fluctuations. Stochastic Thermodynamics uses Markovian jump processes to model the random transitions between the chemical and configurational…

Statistical Mechanics · Physics 2015-10-19 Bernhard Altaner , Artur Wachtel , Jürgen Vollmer

Fluctuation relations are identities, holding in non-equilibrium systems, that have attracted a lot of interest in the last 20 years. This is a series of 4 lectures discussing various aspects of such relations for stochastic equations…

Mathematical Physics · Physics 2013-08-08 Krzysztof Gawedzki

Over last decades, the study of laser fluctuations has shown that laser theory may be regarded as a prototypical example of a nonlinear nonequilibrium problem. The present paper discusses the fluctuation relations, recently derived in…

Statistical Mechanics · Physics 2009-11-13 Raphael Chetrite

We provide a detailed investigation on the fluctuations of the currents in the discrete model of Feynman's ratchet proposed by Jarzynski and Mazonka in 1999. Two macroscopic currents are identified, with the corresponding affinities…

Statistical Mechanics · Physics 2022-08-17 Yu-Xin Wu , Jiayin Gu , H. T. Quan