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Delayed processes are ubiquitous in biological systems and are often characterized by delay differential equations (DDEs) and their extension to include stochastic effects. DDEs do not explicitly incorporate intermediate states associated…

Quantitative Methods · Quantitative Biology 2016-09-28 Jingchen Feng , Stuart Sevier , Bin Huang , Dongya Jia , Herbert Levine

Computer Aided Control System Design (CACSD) allows to analyze complex interconnected systems and design controllers achieving challenging control requirements. We extend CACSD to systems with time delays and illustrate the functionality of…

Systems and Control · Electrical Eng. & Systems 2020-03-26 Suat Gumussoy , Pascal Gahinet

SfePy (Simple Finite Elements in Python) is a framework for solving various kinds of problems (mechanics, physics, biology, ...) described by partial differential equations in two or three space dimensions by the finite element method. The…

Computational Engineering, Finance, and Science · Computer Science 2014-04-30 Robert Cimrman

Time delays are ubiquitous in industry and nature, and they significantly affect both transient dynamics and stability properties. Consequently, it is often necessary to identify and account for the delays when, e.g., designing a…

Dynamical Systems · Mathematics 2024-05-14 Tobias K. S. Ritschel , John Wyller

The inequations of the delays of the asynchronous circuits are written, by making use of pseudo-Boolean differential calculus. We consider these efforts to be a possible starting point in the semi-formalized reconstruction of the digital…

Logic in Computer Science · Computer Science 2007-05-23 Serban E. Vlad

Mathematical modeling based on time-delay differential equations is an important tool to study the role of delay in biological systems and to evaluate its impact on the asymptotic behavior of their dynamics. Delays are indeed found in many…

Dynamical Systems · Mathematics 2022-03-25 Abdelmalik Moujahid , Fernando Vadillo

A novel way of using neural networks to learn the dynamics of time delay systems from sequential data is proposed. A neural network with trainable delays is used to approximate the right hand side of a delay differential equation. We relate…

Machine Learning · Computer Science 2022-08-29 Xunbi A. Ji , Gabor Orosz

scida is a Python package for reading and analyzing large scientific data sets with support for various cosmological and galaxy formation simulations out-of-the-box. Data access is provided through a hierarchical dictionary-like data…

Instrumentation and Methods for Astrophysics · Physics 2024-02-29 Chris Byrohl , Dylan Nelson

Partial differential equations describing the dynamics of physical systems rarely have closed-form solutions. Fourier spectral methods, which use Fast Fourier Transforms (FFTs) to approximate solutions, are a common approach to solving…

In this paper, we propose a novel end-to-end approach for AI-assisted code completion called Pythia. It generates ranked lists of method and API recommendations which can be used by software developers at edit time. The system is currently…

Software Engineering · Computer Science 2019-12-03 Alexey Svyatkovskiy , Ying Zhao , Shengyu Fu , Neel Sundaresan

We present a newly developed software package which implements a wide range of routines frequently used in Weak Gravitational Lensing (WL). With the continuously increasing size of the WL scientific community we feel that easy to use…

Cosmology and Nongalactic Astrophysics · Physics 2016-11-18 Andrea Petri

We present a method for time series analysis of both, scalar and nonscalar time-delay systems. If the dynamics of the system investigated is governed by a time-delay induced instability, the method allows to determine the delay time. In a…

chao-dyn · Physics 2009-10-31 M. J. Bünner , Th. Meyer , A. Kittel , J. Parisi

Data-driven methodologies are nowadays ubiquitous. Their rapid development and spread have led to applications even beyond the traditional fields of science. As far as dynamical systems and differential equations are concerned, neural…

Numerical Analysis · Mathematics 2025-12-05 Dimitri Breda , Xunbi A. Ji , Gábor Orosz , Muhammad Tanveer

We present SSD, Software for Systems with Delays, a de novo MATLAB package for the analysis and model reduction of retarded time delay systems (RTDS). Underneath, our delay system object bridges RTDS representation and Linear Fractional…

Optimization and Control · Mathematics 2022-08-26 Suat Gumussoy

PyODDS is an end-to end Python system for outlier detection with database support. PyODDS provides outlier detection algorithms which meet the demands for users in different fields, w/wo data science or machine learning background. PyODDS…

Machine Learning · Computer Science 2019-10-14 Yuening Li , Daochen Zha , Na Zou , Xia Hu

By developing new efficient techniques and using an appropriate fixed point theorem, we derive several new sufficient conditions for the pseudo almost periodic solutions with double measure for some system of differential equations with…

Analysis of PDEs · Mathematics 2020-03-11 Mohsen Miraoui , Dušan D. Repovš

SpectraPy is an Astropy affiliated package for spectroscopic data reduction. It collects algorithms and methods for data reduction of astronomical spectra obtained by through-slits spectrographs. It has been created to fill the gap in…

Instrumentation and Methods for Astrophysics · Physics 2023-02-10 Marco Fumana

Delayed processes are ubiquitous throughout biology. These delays may arise through maturation processes or as the result of complex multi-step networks, and mathematical models with distributed delays are increasingly used to capture the…

Populations and Evolution · Quantitative Biology 2024-10-15 Tyler Cassidy

Artificial intelligence (AI) is transforming supply chain management, yet progress in predictive tasks -- such as delivery delay prediction -- remains constrained by the scarcity of high-quality, openly available datasets. Existing datasets…

Artificial Intelligence · Computer Science 2025-09-09 Liming Xu , Yunbo Long , Alexandra Brintrup

We study approximation of non-autonomous linear differential equations with variable delay over infinite intervals. We use piecewise constant argument to obtain a corresponding discrete difference equation. The study of numerical…

Classical Analysis and ODEs · Mathematics 2016-07-26 Daniel Sepúlveda