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We introduce a taxonomy of interaction types and show that graphs are focal hypergraphs: every graph is canonically a focal hypergraph via its closed neighbourhood structure, and every graph dynamical model is a special case of the general…

Physics and Society · Physics 2026-03-05 Elkaïoum M. Moutuou

This is a companion report for the OOPSLA 2023 paper of the same title, presenting a detailed end-to-end account of the $\lambda^*_{\mathsf{G}}$ graph IR, at a level of detail beyond a regular conference paper. Our first concern is adequacy…

Programming Languages · Computer Science 2023-09-18 Oliver Bračevac , Guannan Wei , Songlin Jia , Supun Abeysinghe , Yuxuan Jiang , Yuyan Bao , Tiark Rompf

Predictive coding is a message-passing framework initially developed to model information processing in the brain, and now also topic of research in machine learning due to some interesting properties. One of such properties is the natural…

Machine Learning · Computer Science 2022-12-12 Billy Byiringiro , Tommaso Salvatori , Thomas Lukasiewicz

Representing the conditional independences present in a multivariate random vector via graphs has found widespread use in applications, and such representations are popularly known as graphical models or Markov random fields. These models…

Probability · Mathematics 2015-02-02 David Montague , Bala Rajaratnam

Graphs, and sequences of growing graphs, can be used to specify the architecture of mathematical models in many fields including machine learning and computational science. Here we define structured graph "lineages" (ordered by level…

Computer Vision and Pattern Recognition · Computer Science 2025-08-04 Eric Mjolsness , Cory B. Scott

We present the basic ideas of forms (a generalization of Ehresmann's sketches) and their theories and models, more explicitly than in previous expositions. Forms provide the ability to specify mathematical structures and data types in any…

Category Theory · Mathematics 2008-09-19 Atish Bagchi , Charles Wells

We present a semi-supervised learning framework based on graph embeddings. Given a graph between instances, we train an embedding for each instance to jointly predict the class label and the neighborhood context in the graph. We develop…

Machine Learning · Computer Science 2016-05-30 Zhilin Yang , William W. Cohen , Ruslan Salakhutdinov

Automated ICD coding involves assigning standardized diagnostic codes to clinical narratives. The vast label space and extreme class imbalance continue to challenge precise prediction. To address these issues, LabGraph is introduced -- a…

Machine Learning · Computer Science 2026-01-13 Xiaoxiao Deng

We develop a calculus based on graph enumeration for $S_n$-equivariant motivic invariants of graphically stratified moduli spaces. We apply our theory to the Deligne--Mumford moduli space $\overline{\mathcal{M}}_{g, n}$ and to the space of…

Algebraic Geometry · Mathematics 2025-10-09 Siddarth Kannan , Terry Dekun Song

While graphs and abstract data structures can be large and complex, practical instances are often regular or highly structured. If the instance has sufficient structure, we might hope to compress the object into a more succinct…

Computational Complexity · Computer Science 2024-12-02 Shreya Gupta , Boyang Huang , Russell Impagliazzo , Stanley Woo , Christopher Ye

Implicit computational complexity, which aims at characterizing complexity classes by machine-independent means, has traditionally been based, on the one hand, on programs and deductive formalisms for free algebras, and on the other hand on…

Logic in Computer Science · Computer Science 2018-02-12 Daniel Leivant , Jean-Yves Marion

Nondeterminism introduced by race conditions and message reorderings makes parallel and distributed programming hard. Nevertheless, promising approaches such as LVars and CRDTs address this problem by introducing a partial order structure…

Programming Languages · Computer Science 2025-04-07 Nick Rioux , Steve Zdancewic

Answer set programming (ASP) is a popular nonmonotonic-logic based paradigm for knowledge representation and solving combinatorial problems. Computing the answer set of an ASP program is NP-hard in general, and researchers have been…

Artificial Intelligence · Computer Science 2021-04-06 Fang Li , Huaduo Wang , Gopal Gupta

Knowledge graph reasoning in the fully-inductive setting, where both entities and relations at test time are unseen during training, remains an open challenge. In this work, we introduce GraphOracle, a novel framework that achieves robust…

Machine Learning · Computer Science 2025-12-30 Enjun Du , Siyi Liu , Yongqi Zhang

The paper introduces a generalization for known probabilistic models such as log-linear and graphical models, called here multiplicative models. These models, that express probabilities via product of parameters are shown to capture…

Artificial Intelligence · Computer Science 2012-06-18 Ydo Wexler , Christopher Meek

A binary relation on graphs is recursively enumerable if and only if it can be computed by a formula in monadic second-order logic. The latter means that the formula defines a set of graphs, in the usual way, such that each "computation…

Formal Languages and Automata Theory · Computer Science 2020-11-25 Joost Engelfriet

The Lambek calculus is a substructural logic known to be closely related to the formal language theory: on the one hand, it is used for generating formal languages by means of categorial grammars and, on the other hand, it has formal…

Logic · Mathematics 2025-04-22 Tikhon Pshenitsyn

The capacity of unifilar finite-state channels in the presence of feedback is investigated. We derive a new evaluation method to extract graph-based encoders with their achievable rates, and to compute upper bounds to examine their…

Information Theory · Computer Science 2019-07-19 Oron Sabag , Bashar Huleihel , Haim Permuter

Graph-based frames have been introduced as a logical framework which internalizes an inherent boundary to knowability. They also support the interpretation of lattice-based (modal) logics as hyper-constructive logics of evidential…

Frame semantic parsing is a semantic analysis task based on FrameNet which has received great attention recently. The task usually involves three subtasks sequentially: (1) target identification, (2) frame classification and (3) semantic…

Computation and Language · Computer Science 2021-09-28 Zhichao Lin , Yueheng Sun , Meishan Zhang