English
Related papers

Related papers: Weighted-Lasso for Structured Network Inference fr…

200 papers

A perceptron that learns the opposite of its own output is used to generate a time series. We analyse properties of the weight vector and the generated sequence, like the cycle length and the probability distribution of generated sequences.…

Disordered Systems and Neural Networks · Physics 2009-10-31 Richard Metzler , Wolfgang Kinzel , Liat Ein-Dor , Ido Kanter

Distributed Denial of Service (DDoS) attacks are a major concern in network security, as they overwhelm systems with excessive traffic, compromise sensitive data, and disrupt network services. Accurately detecting these attacks is crucial…

Cryptography and Security · Computer Science 2024-10-15 Kanthimathi S , Shravan Venkatraman , Jayasankar K S , Pranay Jiljith T , Jashwanth R

We consider regression scenarios where it is natural to impose an order constraint on the coefficients. We propose an order-constrained version of L1-regularized regression for this problem, and show how to solve it efficiently using the…

Applications · Statistics 2017-06-01 Xiaotong Suo , Robert Tibshirani

Biological structure and function depend on complex regulatory interactions between many genes. A wealth of gene expression data is available from high-throughput genome-wide measurement technologies, but effective gene regulatory network…

Molecular Networks · Quantitative Biology 2016-03-28 Arwen Vanice Bradley , Ye Henry Li , Bokyung Choi , Wing Hung Wong

Gene expression-based heterogeneity analysis has been extensively conducted. In recent studies, it has been shown that network-based analysis, which takes a system perspective and accommodates the interconnections among genes, can be more…

Methodology · Statistics 2023-08-09 Rong Li , Qingzhao Zhang , Shuangge Ma

In this paper, we propose a one-pass algorithm on MapReduce for penalized linear regression \[f_\lambda(\alpha, \beta) = \|Y - \alpha\mathbf{1} - X\beta\|_2^2 + p_{\lambda}(\beta)\] where $\alpha$ is the intercept which can be omitted…

Machine Learning · Statistics 2016-04-15 Kun Yang

We consider a graphical model where a multivariate normal vector is associated with each node of the underlying graph and estimate the graphical structure. We minimize a loss function obtained by regressing the vector at each node on those…

Machine Learning · Statistics 2017-09-19 Xingqi Du , Subhashis Ghosal

In modern recommendation systems, the standard pipeline involves training machine learning models on historical data to predict user behaviors and improve recommendations continuously. However, these data training loops can introduce…

Methodology · Statistics 2024-04-08 Nian Si

The construction of coherent prediction models holds great importance in medical research as such models enable health researchers to gain deeper insights into disease epidemiology and clinicians to identify patients at higher risk of…

Applications · Statistics 2024-01-17 Guanbo Wang , Sylvie Perreault , Robert W. Platt , Rui Wang , Marc Dorais , Mireille E. Schnitzer

We describe a method to construct directed networks from multivariate time series which has several advantages over the widely accepted methods. This method is based on an information theoretic reduction of linear (auto-regressive) models.…

Data Analysis, Statistics and Probability · Physics 2018-08-13 Toshihiro Tanizawa , Tomomichi Nakamura , Fumihiko Taya , Michael Small

Motivated by the problem of inferring the graph structure of functional connectivity networks from multi-level functional magnetic resonance imaging data, we develop a valid inference framework for high-dimensional graphical models that…

Methodology · Statistics 2024-03-18 Kun Yue , Eardi Lila , Ali Shojaie

Gene regulatory networks play a crucial role in controlling an organism's biological processes, which is why there is significant interest in developing computational methods that are able to extract their structure from high-throughput…

Machine Learning · Statistics 2019-09-11 Ioan Gabriel Bucur , Tom Claassen , Tom Heskes

A framework to analyze inference performance in densely connected single-layer feed-forward networks is developed for situations where a given data set is composed of correlated patterns. The framework is based on the assumption that the…

Information Theory · Computer Science 2009-11-13 Yoshiyuki Kabashima

We consider the estimation and inference in a system of high-dimensional regression equations allowing for temporal and cross-sectional dependency in covariates and error processes, covering rather general forms of weak temporal dependence.…

Econometrics · Economics 2020-05-18 Victor Chernozhukov , Wolfgang K. Härdle , Chen Huang , Weining Wang

Motivated by recent experimental developments in functional genomics, we construct and test a numerical technique for inferring it process pathways, in which one process calls another process, from time series data. We validate using a case…

Biological Physics · Physics 2007-05-23 Chris Wiggins , Ilya Nemenman

Transfer learning is an emerging paradigm for leveraging multiple sources to improve the statistical inference on a single target. In this paper, we propose a novel approach named residual importance weighted transfer learning (RIW-TL) for…

Methodology · Statistics 2024-01-04 Junlong Zhao , Shengbin Zheng , Chenlei Leng

We consider the problem of learning a structured multi-task regression, where the output consists of multiple responses that are related by a graph and the correlated response variables are dependent on the common inputs in a sparse but…

Machine Learning · Statistics 2010-05-21 Xi Chen , Seyoung Kim , Qihang Lin , Jaime G. Carbonell , Eric P. Xing

It is known that the Thresholded Lasso (TL), SCAD or MCP correct intrinsic estimation bias of the Lasso. In this paper we propose an alternative method of improving the Lasso for predictive models with general convex loss functions which…

Statistics Theory · Mathematics 2021-01-26 Piotr Pokarowski , Wojciech Rejchel , Agnieszka Soltys , Michal Frej , Jan Mielniczuk

Small disturbances can trigger functional breakdowns in complex systems. A challenging task is to infer the structural cause of a disturbance in a networked system, soon enough to prevent a catastrophe. We present a graph neural network…

Physics and Society · Physics 2020-06-11 Edward Laurence , Charles Murphy , Guillaume St-Onge , Xavier Roy-Pomerleau , Vincent Thibeault

We propose a simple discrete time semi-supervised graph embedding approach to link prediction in dynamic networks. The learned embedding reflects information from both the temporal and cross-sectional network structures, which is performed…

Machine Learning · Statistics 2016-10-17 Ryohei Hisano