English

Process Pathway Inference via Time Series Analysis

Biological Physics 2007-05-23 v1 Data Analysis, Statistics and Probability Genomics Quantitative Methods

Abstract

Motivated by recent experimental developments in functional genomics, we construct and test a numerical technique for inferring it process pathways, in which one process calls another process, from time series data. We validate using a case in which data are readily available and formulate an extension, appropriate for genetic regulatory networks, which exploits Bayesian inference and in which the present--day undersampling is compensated for by prior understanding of genetic regulation.

Keywords

Cite

@article{arxiv.physics/0206031,
  title  = {Process Pathway Inference via Time Series Analysis},
  author = {Chris Wiggins and Ilya Nemenman},
  journal= {arXiv preprint arXiv:physics/0206031},
  year   = {2007}
}