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The self-organization of proteins into enriched compartments and the formation of complex patterns are crucial processes for life on the cellular level. Liquid-liquid phase separation is one mechanism for forming such enriched compartments.…

Soft Condensed Matter · Physics 2025-04-07 Antonia Winter , Yuhao Liu , Alexander Ziepke , George Dadunashvili , Erwin Frey

This work investigates the coverage control problem over a static, compact, and convex workspace and develops a hybrid extension of the continuous-time Lloyd algorithm. Each agent in a multi-agent system (MAS) is equipped with a timer…

Systems and Control · Electrical Eng. & Systems 2024-11-13 Federico M. Zegers , Sean Phillips , Gregory P. Hicks

Membrane pores are implicated in several critical functions, including cell fusion and the transport of signaling molecules for intercellular communication. However, these structural features are often difficult to probe directly. Droplet…

Soft Condensed Matter · Physics 2025-11-13 Nivedina A. Sarma , David A. King , Xuefei Wu , Brett A. Helms , Paul D. Ashby , Thomas P. Russell , Ahmad K. Omar

Recent measurements of durations of non-equilibrium processes provide valuable information on microscopic mechanisms and energetics. Comprehensive theory for corresponding experiments so far is well developed for single-particle systems…

Statistical Mechanics · Physics 2020-09-04 David Voráč , Philipp Maass , Artem Ryabov

Many complex networked systems exhibit volatile dynamic interactions among their vertices, whose order and persistence reverberate on the outcome of dynamical processes taking place on them. To quantify and characterize the similarity of…

Computer modelling for evolutionary systems consists in: 1) to store in the memory the individual features of each member of a large population; and 2) to update the whole system repeatedly, as time goes by, according to some prescribed…

Statistical Mechanics · Physics 2007-05-23 Paulo Murilo Castro de Oliveira

Membranes regulate transport in a wide variety of industrial and biological applications. The microscale geometry of the membrane can significantly affect overall transport through the membrane, but the precise nature of this multiscale…

Soft Condensed Matter · Physics 2026-02-02 Molly Brennan , Edwina F. Yeo , Philip Pearce , Mohit P. Dalwadi

Activity and autonomous motion are fundamental aspects of many living and engineering systems. Here, the scale of biological agents covers a wide range, from nanomotors, cytoskeleton, and cells, to insects, fish, birds, and people. Inspired…

All living cells transport molecules and ions across membranes, often against concentration gradients. This active transport requires continual energy expenditure and is clearly a nonequilibrium process for which standard equilibrium…

Subcellular Processes · Quantitative Biology 2007-05-23 Robert W. Finkel

The near membrane layer is defined as a region where the concentration of the substance transported across the membrane drops $k$ times. The time evolution of such a layer is studied experimentally by means of the laser interferometric…

Condensed Matter · Physics 2007-05-23 Kazimierz Dworecki , Tadeusz Kosztolowicz , Slawomir Wasik , Stanislaw Mrowczynski

Neuronal networks provide living organisms with the ability to process information. They are also characterized by abundant recurrent connections, which give rise to strong feedback that dictates their dynamics and endows them with fading…

Neurons and Cognition · Quantitative Biology 2020-06-24 Miguel A. Casal , Santiago Galella , Oscar Vilarroya , Jordi Garcia-Ojalvo

Adaptive response to a varying environment is a common feature of biological organisms. Reproducing such features in electronic systems and circuits is of great importance for a variety of applications. Here, we consider memory models…

Cell Behavior · Quantitative Biology 2013-10-29 Fabio Lorenzo Traversa , Yuriy V. Pershin , Massimiliano Di Ventra

Membrane transporters contribute to the regulation of the internal environment of cells by translocating substrates across cell membranes. Like all physical systems, the behaviour of membrane transporters is constrained by the laws of…

Biomolecules · Quantitative Biology 2023-07-19 Michael Pan , Peter J. Gawthrop , Kenneth Tran , Joseph Cursons , Edmund J. Crampin

There is a solution to the problem of asymptotic completeness in many body scattering theory that offers a specific view of the quantum unitary dynamics which allows for the straightforward introduction of local time for every, at least…

Quantum Physics · Physics 2014-09-18 J. Jeknic-Dugic , M. Arsenijevic , M. Dugic

Positive linear systems on arbitrary time scales are studied. The theory developed in the paper unifies and extends concepts and results known for continuous-time and discrete-time systems. A necessary and sufficient condition for a linear…

Optimization and Control · Mathematics 2012-04-17 Zbigniew Bartosiewicz

The aim of this work is to establish the existence of invariant manifolds in complex systems. Considering trajectory curves integral of multiple time scales dynamical systems of dimension two and three (predator-prey models, neuronal…

Dynamical Systems · Mathematics 2014-08-19 Jean-Marc Ginoux , Bruno Rossetto

Shared Memory is a mechanism that allows several processes to communicate with each other by accessing -- writing or reading -- a set of variables that they have in common. A Consistency Model defines how each process observes the state of…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-26 Jordi Bataller Mascarell

This paper introduces a new behavioral system model with distinct external and internal signals possibly evolving on different time scales. This allows to capture abstraction processes or signal aggregation in the context of control and…

Systems and Control · Computer Science 2014-02-17 Anne-Kathrin Schmuck , Jörg Raisch

Collective cell motility is crucial to many biological processes including morphogenesis, wound healing, and cancer invasion. Recently, the biology and biophysics communities have begun to use the term cell jamming to describe the…

Biological Physics · Physics 2021-02-23 Elizabeth Lawson-Keister , M. Lisa Manning

Machine learning (ML) has emerged as a pervasive tool in science, engineering, and beyond. Its success has also led to several synergies with molecular dynamics (MD) simulations, which we use to identify and characterize the major…

Biomolecules · Quantitative Biology 2022-05-09 Christopher Kolloff , Simon Olsson
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