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We experimentally investigate the effect of particle size on the motion of passive polystyrene spheres in suspensions of Escherichia coli. Using particles covering a range of sizes from 0.6 to 39 microns, we probe particle dynamics at both…

Biological Physics · Physics 2016-02-08 Alison E. Patteson , Arvind Gopinath , Prashant K. Purohit , Paulo E. Arratia

Particles kicked by external forces to produce mobility distinct from thermal diffusion are an iconic feature of the active matter problem. Here, we map this onto a minimal model for experiment and theory covering the wide time and length…

Soft Condensed Matter · Physics 2021-01-21 Jin Tae Park , Govind Paneru , Chulan Kwon , Steve Granick , Hyuk Kyu Pak

The formation of the observed core-halo feature in the solar wind electron velocity distribution function is a long-time puzzle. In this letter based on the current knowledge of nanoflares we show that the nanoflare-accelerated electron…

Solar and Stellar Astrophysics · Physics 2015-06-23 H. Che , M. Goldstein

Rolling of a small sphere on a solid support is governed by a non-linear friction that is akin to the Coulombic dry fiction. No motion occurs when the external field is weaker than the frictional resistance. However, with the intervention…

Statistical Mechanics · Physics 2012-03-22 P. S. Goohpattader , M. K. Chaudhury

We demonstrate 'differential dynamic microscopy' (DDM) for the fast, high throughput characterization of the dynamics of active particles. Specifically, we characterize the swimming speed distribution and the fraction of motile cells in…

Quantitative Methods · Quantitative Biology 2011-07-12 Laurence G. Wilson , Vincent A. Martinez , Jana Schwarz-Linek , J. Tailleur , Peter N. Pusey , Gary Bryant , Wilson C. K. Poon

Bacterial flagellar swarming enables dense microbial populations to migrate collectively across surfaces, often resulting in emergent, coordinated behaviors. However, probing the underlying energetics of swarming at the single cluster level…

We study a model of self propelled particles exhibiting run and tumble dynamics on lattice. This non-Brownian diffusion is characterised by a random walk with a finite persistence length between changes of direction, and is inspired by the…

Statistical Mechanics · Physics 2015-03-17 A. G. Thompson , J. Tailleur , M. E. Cates , R. A. Blythe

We consider self-propelled particles undergoing run-and-tumble dynamics (as exhibited by E. coli) in one dimension. Building on previous analyses at drift-diffusion level for the one-particle density, we add both interactions and noise,…

Statistical Mechanics · Physics 2008-08-14 J. Tailleur , M. E. Cates

Molecular dynamics simulations of SPC/E water confined in a Silica pore are presented. The simulations have been performed at different hydration levels and temperatures to study the single-particle dynamics. Due to the confinement and to…

Soft Condensed Matter · Physics 2017-08-23 Paola Gallo

There is increasing evidence that mammalian cells not only crawl on substrates but can also swim in fluids. To elucidate the mechanisms of the onset of motility of cells in suspension, a model which couples actin and myosin kinetics to…

Biological Physics · Physics 2019-09-18 Alexander Farutin , Jocelyn Etienne , Chaouqi Misbah , Pierre Recho

Mesoscopic active systems exhibit various unique behaviours - absent in passive systems - due to the forces generated by the corresponding constituents by converting their available free energies. However, estimating these forces - which…

Different propulsion mechanisms have been suggested for describing the motion of a variety of chemical micromotors, including the bubble-recoil mechanism, which has attracted great attention in the last decades due to its high efficiency…

Chemical Physics · Physics 2020-10-19 Paul Wrede , Mariana Medina-Sánchez , Vladimir M. Fomin , Oliver G. Schmidt

The precise description of the motion of anisotropic particles in a flow rests on the understanding of the force and torque acting on them. Here, we study experimentally small, very elongated particles settling in a fluid at small Reynolds…

Fluid Dynamics · Physics 2022-11-29 F. Cabrera , M. Z. Sheikh , B. Mehlig , N. Plihon , M. Bourgoin , A. Pumir , A. Naso

Growing living cultures of Escherichia coli bacteria were investigated using real-time in situ rheology and rheo-imaging measurements. In the early stages of growth (lag phase), and when subjected to a constant stationary shear, the…

Biological Physics · Physics 2016-12-21 R. Portela , P. Patrício , P. L. Almeida , R. G. Sobral , J. M. Franco , C. R. Leal

The locomotion of swimming bacteria in simple Newtonian fluids can successfully be described within the framework of low Reynolds number hydrodynamics. The presence of polymers in biofluids generally increases the viscosity, which is…

Soft Condensed Matter · Physics 2019-08-12 Andreas Zöttl , Julia M. Yeomans

Molecular dynamics simulations with separate thermostats for rotational and translational motions were used to study the effects of these degrees of freedom on the structure of water at a fixed density. To describe water molecules, we used…

Soft Condensed Matter · Physics 2015-04-06 T. Mohorič , B. Hribar-Lee , V. Vlachy

The kinematic and radiative power of molecular jets is expected to change as a protostar undergoes permanent or episodal changes in the rate at which it accretes. We study here the consequences of evolving jet power on the spatial and…

Astrophysics · Physics 2009-11-07 Alexander Rosen , Michael D. Smith

We study the scattering properties of topological solitons on obstructions in the form of holes and barriers. We use the 'new baby Skyrme' model in (2+1) dimensions and we model the obstructions by making the coefficient of the baby skyrme…

High Energy Physics - Theory · Physics 2007-05-23 Bernard Piette , W. J. Zakrzewski , Joachim Brand

Ciliary flows are generated by a vast array of eukaryotic organisms, from unicellular algae to mammals, and occur in a range of different geometrical configurations. We employ a point torque -- or `rotlet' -- model to capture the…

The flexibility of the bacterial flagellar hook is believed to have substantial consequences for microorganism locomotion. Using a simplified model of a rigid flagellum and a flexible hook, we show that the paths of axisymmetric cell bodies…

Biological Physics · Physics 2021-10-28 Zonghao Zou , Wilson Lough , Saverio E. Spagnolie