Related papers: Topological phonon modes and their role in dynamic…
We use the methods of topological quantum chemistry to explore the topology of phonons on time-reversal symmetric crystals with the structure of the planar honeycomb (layer group $p6/mmm$). This approach is not tied to a particular model of…
The optical Kerr micro-ring provides an ideal platform for the study of dissipative optical solitons. Dissipative solitons are localized waves produced by a precise equilibrium between dispersion and nonlinearity, as well as gain and loss.…
We perform both lattice dynamics analysis and molecular dynamics simulations to demonstrate the existence of topologically protected phonon modes in a two-dimensional, monolayer hexagonal boron nitride sheet. The topological phonon modes…
Silicon nanotube is constructed by rolling up a silicene, i.e., a monolayer of silicon atoms forming a two-dimensional honeycomb lattice. It is a semiconductor or an insulator owing to relatively large spin-orbit interactions induced by its…
Topologically-engineered mechanical frames are important model constructs for architecture, machine mechanisms, and metamaterials. Despite significant advances in macroscopically fashioned frames, realization and phonon imaging of…
There are large isotope effects in the phonon kinks observed in photoemission spectra (ARPES) of optimally doped cuprate high temperature superconductors (HTSC), but they are quite different (Gweon et al. 2004) from those expected for a…
We present an analysis of the role of global topology on the structural stability of folded proteins in thermal equilibrium with a heat bath. For a large class of single domain proteins, we compute the harmonic spectrum within the Gaussian…
Microtubules (MTs) are important cytoskeletal structures, engaged in a number of specific cellular activities, including vesicular traffic, cell cyto-architecture and motility, cell division, and information processing within neuronal…
Phonon transmission across an interface between dissimilar crystalline solids is calculated using molecular dynamics simulations with interatomic force constants obtained from first principles. The results reveal that although inelastic…
A synergetic model describing the state of an ultrathin lubricant layer squeezed between two atomically smooth solid surfaces operating in the boundary friction mode has been developed further. To explain the presence of different operation…
Coherent, optically dressed media composed of two-level molecular systems without inversion symmetry are considered as all-optically tunable sources of coherent radiation in the microwave domain. A theoretical model and a numerical toolbox…
We study band modulations and topological transitions in a one-dimensional periodic bead-on-string chain. Using an exact transfer-matrix formulation of the wave equation with periodically modulated mass density, combined with numerical…
Biomolecular structures are assemblies of emergent anisotropic building modules such as uniaxial helices or biaxial strands. We provide an approach to understanding a marginally compact phase of matter that is occupied by proteins and DNA.…
We consider complex-balanced mass-action systems, or toric dynamical systems. They are remarkably stable polynomial dynamical systems arising from reaction networks seen as Euclidean embedded graphs. We study the moduli spaces of toric…
Liquid-liquid phase separation occurs not only in bulk liquid, but also on surfaces. In physiology, the nature and function of condensates on cellular structures remain unexplored. Here, we study how the condensed protein TPX2 behaves on…
Moir\'e heterostructures provide a powerful framework for tailoring electronic band structures via controlled long-range periodic superlattice potentials. Beyond widely studied moir\'e-tailored flat bands, folded band structures can host…
A common type of cytoskeletal morphology involves multiple converging microbutubules with their minus ends collected and stabilized by a microtubule organizing center (MTOC) in the interior of the cell. This arrangement enables the…
Stripe order where electrons self-organize into alternating periodic charge-rich and magnetically-ordered charge-poor parallel lines was proposed as a way of optimizing the kinetic energy of holes in a doped Mott insulator. Static stripes…
Robust zero modes supported by defects is one of the key features of topological matter. Its presence renders a system topologically inhomegeneuous, thus having no well-defined global topological invariant. The quantities labeling different…
We study the realization of lattice models, where cold atoms and molecules move as extra particles in a dipolar crystal of trapped polar molecules. The crystal is a self-assembled floating mesoscopic lattice structure with quantum dynamics…