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Molecular dynamics simulations have been performed to study frictional slip and its influence on energy dissipation and momentum transfer at atomically smooth solid/water interfaces. By modifying surface chemistry, we investigate the…

Fluid Dynamics · Physics 2016-08-08 Kai Huang , Izabela Szlufarska

Transport networks are typically optimized, either by evolutionary pressures in biological systems or by human design in engineered structures. In the case of systems such as the animal vasculature, the transport of fluids is hindered by…

Biological Physics · Physics 2023-02-27 Sean Fancher , Eleni Katifori

The joint magnetic and mechanical motion of a ferromagnetic nanoparticle in a viscous fluid is considered within the dynamical approach. The equation based on the total momentum conservation law is used for the description of the mechanical…

Other Condensed Matter · Physics 2018-04-03 T. V. Lyutyy , O. M. Hryshko , A. A. Kovner

Steady swimming can be characterized as both periodic and stable. These characteristics are the very definition of limit cycles, and so we ask "Can we view swimming as a limit cycle?" In this paper we will find that the answer is "yes". We…

Dynamical Systems · Mathematics 2012-12-11 Henry O. Jacobs

The drying of hydrophobic cavities is believed to play an important role in biophysical phenomena such as the folding of globular proteins, the opening and closing of ligand-gated ion channels, and ligand binding to hydrophobic pockets. We…

Soft Condensed Matter · Physics 2012-02-29 Sumit Sharma , Pablo G. Debenedetti

Despite their importance in many biological, ecological and physical processes, microorganismal fluid flows under tight confinement have not been investigated experimentally. Strong screening of Stokelets in this geometry suggests that the…

Biological Physics · Physics 2019-12-18 Raphaël Jeanneret , Dmitri O. Pushkin , Marco Polin

Yagasaki et al. present results from a molecular dynamics trajectory illustrating coarsening of ice, which they interpret as evidence of transient coexistence between two distinct supercooled phases of liquid water. We point out that…

Statistical Mechanics · Physics 2014-07-22 David T. Limmer , David Chandler

We show that the constant time lag prescription for tidal dissipation follows directly from the equations of motion of a tidally-forced viscous fluid body, given some basic assumptions. They are (i) dissipation results from a viscous force…

Earth and Planetary Astrophysics · Physics 2012-10-15 Aristotle Socrates , Boaz Katz

We study indented spherical colloids, interacting via depletion forces. These systems exhibit liquid-vapor phase transitions whose properties are determined by a combination of strong "lock-and-key" bonds and weaker non-specific…

Soft Condensed Matter · Physics 2015-06-17 Douglas J. Ashton , Robert L. Jack , Nigel B. Wilding

We report the experimental observation of vortex leapfrogging in a two-dimensional fluid of light. By imprinting two vortex-antivortex pairs and tracking their real-time evolution through phase-resolved imaging, we observe a dynamics that…

Quantum Gases · Physics 2025-12-10 Myrann Baker-Rasooli , Nathan du Toit , Nicolas Pavloff , Quentin Glorieux

Water is routinely exposed to external electric fields (EFs). Whether, e.g., at physiological conditions, in contact with biological systems, or at the interface of polar surfaces in countless technological and industrial settings, water…

Chemical Physics · Physics 2023-08-10 Giuseppe Cassone , Fausto Martelli

We study dynamical phase transitions in a model supercooled liquid. These transitions occur in ensembles of trajectories that are biased towards low (or high) dynamical activity. We compare two different measures of activity that were…

Statistical Mechanics · Physics 2015-06-15 Christopher J. Fullerton , Robert L. Jack

Recent work has shown that the resistive force arising from viscous effects within the pore region could explain [Ghosal, S. Phys. Rev. E. vol. 71, 051904 (2006) and Phys. Rev. Lett. vol. 98, 238104 (2007)] observed translocation times in…

Biological Physics · Physics 2012-03-12 Sandip Ghosal

We investigate collective dissipative properties of vibrated granular materials by means of molecular dynamics simulations. Rates of energy losses indicate three different regimes or "phases"in the amplitude-frequency plane of the external…

Materials Science · Physics 2009-10-31 Clara Saluena , Thorsten Poeschel , Sergei E. Esipov

In this work, the exact dynamics of excitation in the generalized Aubry-Andr\'{e}-Harper model coupled with an Ohmic-type environment is discussed by evaluating the survival probability and inverse participation ratio of the state of…

Quantum Physics · Physics 2022-07-28 H. T. Cui , M. Qin , L. Tang , H. Z. Shen , X. X. Yi

Living organisms are inherently out-of-equilibrium systems. We employ new developments in stochastic energetics and rely on a minimal microscopic model to predict the amount of mechanical energy dissipated by such dynamics. Our model…

Biological processes like the sequestration of Superoxide Dismutase 1 (SOD1) into biomolecular condensates such as FUS and stress granules are essential to understanding disease mechanisms, including amyotrophic lateral sclerosis (ALS). Our…

Statistical Mechanics · Physics 2025-10-08 Luis Enrique Coronas , Stepan Timr , Fabio Sterpone , Giancarlo Franzese

We explore in this paper the phenomenon of photofocusing: a coupling between flow vorticity and biased swimming of microalgae toward a light source that produces a focusing of the microswimmer suspension. We combine experiments that…

Soft Condensed Matter · Physics 2016-05-25 Matthieu Martin , Alexandre Barzyk , Eric Bertin , Philippe Peyla , Salima Rafai

Active liquid-liquid phase separation (LLPS) in a confining environment is believed to play an important role in cell biology. Recently, it was shown that when active noise at the microscopic level is included in the classical theory of…

Soft Condensed Matter · Physics 2024-08-16 Chen Lin , Robijn Bruinsma

It is argued that the van der Waals force exerted by the liquid and vapor/air on the molecules escaping from one phase into the other strongly affects the characteristics of evaporation. This is shown using two distinct descriptions of the…

Soft Condensed Matter · Physics 2024-02-14 E. S. Benilov