Related papers: Hyper-sound as a means for generating inter-strand…
Acoustically excited bubbles are involved in a wide range of phenomena and applications ranging from oceanography to sonoluminescence; they have applications in chemistry, medical imaging, and therapeutic ultrasound. The complexity of…
We have recently suggested that the probability for the formation of thermally activated DNA bubbles is, to a very good approximation, proportional to the number of soft AT pairs over a length L(n) that depend on the size $n$ of the bubble…
We study the internal resonance, energy transfer, activation mechanism, and control of a model of DNA division via parametric resonance. While the system is robust to noise, this study shows that it is sensitive to specific fine scale modes…
Recent studies have suggested a new phase in the extended Bose-Hubbard model in one dimension at integer filling [1,2]. In this work, we show that this new phase is phase-separated into a supersolid and superfluid part, generated by…
The puzzle of birth velocities of pulsars (pulsar kicks) could be solved by an asymmetric explosion of type II Supernovae. We propose a simple hydrodynamical mechanism in order to explain this asymmetry, through the advective-acoustic cycle…
Repulsive interactions between particles on a lattice may lead to bound states, so called doublons. Such states may be created by dynamically tuning the interaction strength, e.g. using a Feshbach resonance, from attraction to repulsion. We…
We numerically study stochastic resonance in the unzipping of a model double-stranded DNA by a periodic force. We observe multiple peaks in stochastic resonance in the output signal as the driving force frequency is varied for different…
A sound wave travelling in water is scattered by a periodic assembly of air bubbles. The local structure matters even in the low frequency regime. If the bubbles are arranged in a face-centered cubic (fcc) lattice, a total band gap opens…
Recent advances in transport properties measurements of disordered materials and lattice simulations, using superconducting qubits, have rekindled interest in Anderson localization, motivating our study of highly disordered quantum…
We report an instability exhibited by a fluid system when coupling two distinct types of waves, both linearly damped. While none of them is unstable on its own, they amplify one another, resulting in a previously unreported convective…
Free electrons hopping on hyperbolic lattices embedded on a negatively curved space can foster (a) Dirac liquids, (b) Fermi liquids, and (c) flat bands, respectively characterized by a vanishing, constant, and divergent density of states…
We investigate electronic properties of the doped two-leg Hubbard ladder with both the onsite and the nearest-neighbor Coulomb repulsions, by using the the weak-coupling renormalization-group method. It is shown that, for strong…
Three coarse-grained models of the double-stranded DNA are proposed and compared in the context of mechanical manipulation such as twisting and various schemes of stretching. The models differ in the number of effective beads (between two…
We investigate the perturbation dynamics in a supersonic shear layer using a combination of large-eddy simulations (LES) and linear-operator-based input-output analysis. The flow consists of two streams-a main stream (Mach 1.23) and a…
Supersymmetric lattice models of constrained fermions are known to feature exotic phenomena such as superfrustration, with an extensive degeneracy of ground states, the nature of which is however generally unknown. Here we address this…
Exact solutions are presented for a doubly-periodic array of steadily moving bubbles in a Hele-Shaw cell when surface tension is neglected. It is assumed that the bubbles either are symmetrical with respect to the channel centreline or have…
We characterize the equilibrium thermodynamics of a thick polymer confined in a spherical region of space. This is used to gain insight into the DNA packaging process. The experimental reference system for the present study is the recent…
Flat bands, in which kinetic energy is quenched and quantum states become macroscopically degenerate, host a rich variety of correlated and topological phases, from unconventional superconductors to fractional Chern insulators. In Hermitian…
We study the unexpected high flexibility of short dsDNA which recently has been reported by a number of experiments. Via the Langevin dynamics simulation of our Breathing DNA model, first we observe the formation of bubbles within the…
We consider DNA-cationic lipid complexes that form lamellar stacks of lipid bilayers with parallel DNA strands intercalated in between. We calculate the electrostatically induced elastic deformations of the lipid bilayers. It is found that…