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Electron tomography is a technique used in both materials science and structural biology to image features well below optical resolution limit. In this work, we present a new algorithm for reconstructing the three-dimensional(3D)…

Signal Processing · Electrical Eng. & Systems 2018-07-12 David Ren , Michael Chen , Laura Waller , Colin Ophus

The application of wide field-of-view detection systems to atom probe experiments emphasizes the importance of careful parameter selection in the tomographic reconstruction of the analysed volume, as the sensitivity to errors rises steeply…

Instrumentation and Detectors · Physics 2015-10-13 Baptiste Gault , Frederic De Geuser , Leigh T. Stephenson , Michael P. Moody , Barry C. Muddle , Simon P. Ringer

We present an image recovery approach to improve amplitude and phase reconstruction from single shot digital holograms, using iterative reconstruction with alternating updates. This approach allows the flexibility to apply different priors…

Optics · Physics 2016-10-04 Dennis J. Lee , Charles A. Bouman , Andrew M. Weiner

Iterative image reconstruction algorithms for optoacoustic tomography (OAT), also known as photoacoustic tomography, have the ability to improve image quality over analytic algorithms due to their ability to incorporate accurate models of…

Analysis of PDEs · Mathematics 2015-06-05 Kun wang , Richard Su , Alexander A. Oraevsky , Mark A. Anastasio

We present an adaptive sampling approach to 3D reconstruction of the welding joint using the point cloud that is generated by a laser sensor. We start with a randomized strategy to approximate the surface of the volume of interest through…

Robotics · Computer Science 2015-07-09 Soheil Keshmiri , Syeda Mariam Ahmed , Yue Wu , Chee Meng Chew , Chee Khiang Pang

A unified method for three-dimensional reconstruction of objects from transmission images collected at multiple illumination directions is described. The method may be applicable to experimental conditions relevant to absorption-based,…

Medical Physics · Physics 2022-12-07 Timur E. Gureyev , Hamish G. Brown , Harry M. Quiney , Leslie J. Allen

In this paper, we introduce a method to build an adapted mesh representation of a 3D object for X-Ray tomography reconstruction. Using this representation, we provide means to reduce the computational cost of reconstruction by way of…

Computer Vision and Pattern Recognition · Computer Science 2015-07-30 Anthony Cazasnoves , Fanny Buyens , Sylvie Sevestre

We introduce a Bayesian genetic algorithm for reconstructing atomic models of nanoparticles from a single projection using Z-contrast imaging. The number of atoms in a projected atomic column obtained from annular dark field scanning…

Materials Science · Physics 2022-03-31 Annick De Backer , Sandra Van Aert , Peter D. Nellist , Lewys Jones

We consider the imaging problem of the reconstruction of a three-dimensional object via optical diffraction tomography under the assumptions of the Born approximation. Our focus lies in the situation that a rigid object performs an…

Numerical Analysis · Mathematics 2024-07-11 Robert Beinert , Michael Quellmalz

I propose an iterative expectation maximization algorithm for reconstructing a quantum optical ensemble from a set of balanced homodyne measurements performed on an optical state. The algorithm applies directly to the acquired data,…

Quantum Physics · Physics 2009-11-10 A. I. Lvovsky

We present a reconstruction technique for simultaneous retrieval of absorption and phase shifting properties of an object recorded by in-line holography. The routine is experimentally tested by applying it to optical holograms of a pure…

Optics · Physics 2010-10-28 Tatiana Latychevskaia , Hans-Werner Fink

Accurate three dimensional reconstructions of atomic positions, and full quantification of the information contained in atom probe tomography data relies on understanding the physical processes taking place during field evaporation of atoms…

Atomic Physics · Physics 2016-01-20 Lan Yao , Travis Withrow , Oscar D. Restrepo , Wolfgang Windl , Emmanuelle A. Marquis

We develop a novel algorithm for large-scale holographic reconstruction of 3D particle fields. Our method is based on a multiple-scattering beam propagation method (BPM) combined with sparse regularization that enables recovering dense 3D…

Optics · Physics 2021-05-24 Hao Wang , Waleed Tahir , Jiabei Zhu , Lei Tian

Electron tomography is becoming an increasingly important tool in materials science for studying the three-dimensional morphologies and chemical compositions of nanostructures. The image quality obtained by many current algorithms is…

Orbital tomography has recently been established as a technique to reconstruct molecular orbitals directly from photoemission data using iterative phase retrieval algorithms. In this work, we present a detailed description of steps for…

This work describes extensions to existing level-set algorithms developed for application within the field of Atom Probe Tomography (APT). We present a new simulation tool for the simulation of 3D tomographic volumes, using advanced level…

Computational Physics · Physics 2018-02-28 Daniel Haley , Paul A. J. Bagot , Michael P. Moody

We present fast parallel rearrangement of single atoms in optical tweezers into arbitrary geometries by updating holograms displayed by an ultra fast spatial light modulator. Using linear interpolation of the tweezer position and the…

Atom probe tomography (APT) is a 3D analysis technique that offers unique chemical accuracy and sensitivity with sub-nanometer spatial resolution. Recently, there is an increasing interest in the application of APT to complex oxides…

In the DEAP-3600 dark matter search experiment, precise reconstruction of the positions of scattering events in liquid argon is key for background rejection and defining a fiducial volume that enhances dark matter candidate events…

Instrumentation and Detectors · Physics 2025-10-13 The DEAP Collaboration , P. Adhikari , R. Ajaj , M. Alpízar-Venegas , P. -A. Amaudruz , J. Anstey , G. R. Araujo , D. J. Auty , M. Baldwin , M. Batygov , B. Beltran , H. Benmansour , M. A. Bigentini , C. E. Bina , J. Bonatt , W. M. Bonivento , M. G. Boulay , B. Broerman , J. F. Bueno , P. M. Burghardt , A. Butcher , M. Cadeddu , B. Cai , M. Cárdenas-Montes , S. Cavuoti , M. Chen , Y. Chen , S. Choudhary , B. T. Cleveland , J. M. Corning , R. Crampton , D. Cranshaw , S. Daugherty , P. DelGobbo , K. Dering , P. Di Stefano , J. DiGioseffo , G. Dolganov , L. Doria , F. A. Duncan , M. Dunford , E. Ellingwood , A. Erlandson , S. S. Farahani , N. Fatemighomi , G. Fiorillo , S. Florian , A. Flower , R. J. Ford , R. Gagnon , D. Gahan , D. Gallacher , A. Garai , P. García Abia , S. Garg , P. Giampa , A. Giménez-Alcázar , D. Goeldi , V. V. Golovko , P. Gorel , K. Graham , D. R. Grant , A. Grobov , A. L. Hallin , M. Hamstra , P. J. Harvey , S. Haskins , C. Hearns , J. Hu , J. Hucker , T. Hugues , A. Ilyasov , B. Jigmeddorj , C. J. Jillings , A. Joy , O. Kamaev , G. Kaur , A. Kemp , M. Khoshraftar Yazdi , M. Kuźniak , F. La Zia , M. Lai , S. Langrock , B. Lehnert , A. Leonhardt , J. LePage-Bourbonnais , N. Levashko , J. Lidgard , T. Lindner , M. Lissia , J. Lock , L. Luzzi , I. Machulin , P. Majewski , A. Maru , J. Mason , A. B. McDonald , T. McElroy , T. McGinn , J. B. McLaughlin , R. Mehdiyev , C. Mielnichuk , L. Mirasola , A. Moharana , J. Monroe , A. Murray , P. Nadeau , C. Nantais , C. Ng , A. J. Noble , E. O'Dwyer , G. Oliviéro , M. Olszewski , C. Ouellet , S. Pal , D. Papi , B. Park , P. Pasuthip , S. J. M. Peeters , M. Perry , V. Pesudo , E. Picciau , M. -C. Piro , T. R. Pollmann , F. Rad , E. T. Rand , C. Rethmeier , F. Retière , I. Rodríguez García , L. Roszkowski , J. B. Ruhland , R. Santorelli , F. G. Schuckman , N. Seeburn , S. Seth , V. Shalamova , K. Singhrao , P. Skensved , T. Smirnova , N. J. T. Smith , B. Smith , K. Sobotkiewich , T. Sonley , J. Sosiak , J. Soukup , R. Stainforth , G. Stanic , C. Stone , V. Strickland , M. Stringer , B. Sur , J. Tang , R. Turcotte-Tardif , E. Vázquez-Jáuregui , L. Veloce , S. Viel , B. Vyas , M. Walczak , J. Walding , M. Waqar , M. Ward , S. Westerdale , J. Willis , R. Wormington , A. Zuñiga-Reyes

We present a method for recovery of narrow homogeneous spectral features out of broad inhomogeneous overlapped profile based on second-derivative processing of the absorption spectra of alkali metal atomic vapor nanocells. The method is…

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