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Experimental fMRI studies have shown that spontaneous brain activity i.e. in the absence of any external input, exhibit complex spatial and temporal patterns of co-activity between segregated brain regions. These so-called large-scale…

Adaptation and Self-Organizing Systems · Physics 2015-06-23 Vesna Vuksanović , Philipp Hövel

We study the effect that the heterogeneity present among the elements of an ensemble of coupled excitable neurons have on the collective response of the system to an external signal. We have considered two different interaction scenarios,…

Biological Physics · Physics 2010-03-31 T. Perez , C. R. Mirasso , R. Toral , J. D. Gunton

In recent years, the study of coupled excitable oscillators has largely benefited from a new analytical technique developed by Ott and Antonsen. This technique allows to express the dynamics of certain macroscopic observable in the ensemble…

Adaptation and Self-Organizing Systems · Physics 2019-02-19 Gonzalo Uribarri , Gabriel B. Mindlin

We study the dynamics of excitable integrate-and-fire neurons in a small-world network. At low densities $p$ of directed random connections, a localized transient stimulus results in either self-sustained persistent activity or in a brief…

Pattern Formation and Solitons · Physics 2009-11-10 Alex Roxin , Hermann Riecke , Sara A. Solla

We study the spatio-temporal dynamics of a model of polar active fluid in two dimensions. The system exhibits a transition from an isotropic to a polarized state as a function of density. The uniform polarized state is, however, unstable…

Soft Condensed Matter · Physics 2011-12-08 Luca Giomi , M. Cristina Marchetti

This chapter revisits the concept of excitability, a basic system property of neurons. The focus is on excitable systems regarded as behaviors rather than dynamical systems. By this we mean open systems modulated by specific interconnection…

Neurons and Cognition · Quantitative Biology 2017-04-18 Rodolphe Sepulchre , Guillaume Drion , Alessio Franci

Electrical neural signalling typically takes place at the time-scale of milliseconds, and is typically modeled using the cable equation. This is a good approximation for processes when ionic concentrations vary little during the time course…

Cell Behavior · Quantitative Biology 2014-03-05 Geir Halnes , Ivar Østby , Klas H. Pettersen , Stig W. Omholt , Gaute T. Einevoll

Periodic pulse train stimulation is generically used to study the function of the nervous system and to counteract disease-related neuronal activity, e.g., collective periodic neuronal oscillations. The efficient control of neuronal…

Adaptation and Self-Organizing Systems · Physics 2020-08-05 Kestutis Pyragas , Augustinas P. Fedaravičius , Tatjana Pyragienė

The diffusion of active microscopic organisms in complex environments plays an important role in a wide range of biological phenomena from cell colony growth to single organism transport. Here, we investigate theoretically and…

Fluid Dynamics · Physics 2018-01-16 Juan L. Aragones , Shahrzad Yazdi , Alfredo Alexander-Katz

In this paper we present the results of parallel numerical computations of the long-term dynamics of linked vortex filaments in a three-dimensional FitzHugh-Nagumo excitable medium. In particular, we study all torus links with no more than…

Pattern Formation and Solitons · Physics 2019-03-07 Fabian Maucher , Paul Sutcliffe

Using a stochastic generalization of the Hodgkin–Huxley model, we consider the influence of intrinsic channel noise on the synchronization between the spiking activity of the excitable membrane and an externally applied periodic…

Biological Physics · Physics 2007-05-23 Gerhard Schmid , Igor Goychuk , Peter Hanggi

It is shown that arbitrarily weak (frozen) heterogeneity can induce global synchronized oscillations in excitable media close to threshold. The work is carried out on networks of coupled van der Pol-FitzHugh-Nagumo oscillators. The result…

Pattern Formation and Solitons · Physics 2007-05-23 Cristian Degli Esposti Boschi , Enrique Louis , Guillermo Ortega

Abridged abstract: Inert interactions between randomly moving entities and spatial disorder play a crucial role in quantifying the diffusive properties of a system. These interactions affect only the movement of the entities, and examples…

Statistical Mechanics · Physics 2022-09-20 Seeralan Sarvaharman , Luca Giuggioli

Exchange of molecules allows cells to exchange information. How robust is the information to changes in cell parameters? We use a mapping between the stochastic dynamics of two cells sharing a stimulatory molecule, and parameters akin to an…

Biological Physics · Physics 2024-07-10 Ismail Qunbar , Michael Vennettilli , Amir Erez

We study numerically the effects of time delay in networks of delay-coupled excitable FitzHugh Nagumo systems with dissipation. The generation of periodic self-sustained oscillations and its threshold are analyzed depending on the…

Adaptation and Self-Organizing Systems · Physics 2023-07-19 A. V. Bukh , I. A. Shepelev , E. M. Elizarov , S. S. Muni , E. Schöll , G. I. Strelkova

Like many other biological processes, calcium dynamics in neurons containing an endoplasmic reticulum are governed by diffusion-reaction equations on interface-separated domains. Interface conditions are typically described by systems of…

Numerical Analysis · Mathematics 2022-03-14 Qingguang Guan , Gillian Queisser

Recurrent networks of dynamic elements frequently exhibit emergent collective oscillations, which can display substantial regularity even when the individual elements are considerably noisy. How noise-induced dynamics at the local level…

Adaptation and Self-Organizing Systems · Physics 2017-01-04 Belen Sancristobal , Beatriz Rebollo , Pol Boada , Maria V. Sanchez-Vives , Jordi Garcia-Ojalvo

We investigate diffusion-driven instabilities in a FitzHugh-Nagumo reaction-diffusion system with superdiffusive transport, modeled by fractional Laplacian operators with different diffusion orders for the activator and the inhibitor. A…

Pattern Formation and Solitons · Physics 2026-03-04 Rossella Rizzo , Gaetana Gambino , Vincenzo Sciacca , Marco Sammartino

Driven particles in presence of crowded environment, obstacles or kinetic constraints often exhibit negative differential mobility (NDM) due to their decreased dynamical activity. We propose a new mechanism for complex many-particle systems…

Statistical Mechanics · Physics 2018-06-06 Amit Kumar Chatterjee , Urna Basu , P. K. Mohanty

While the dynamics of polymer chains in equilibrium media is well understood by now, the polymer dynamics in active non-equilibrium environments can be very different. Here we study the dynamics of polymers in a viscous medium containing…

Soft Condensed Matter · Physics 2017-06-23 Jaeoh Shin , Andrey G. Cherstvy , Won Kyu Kim , Vasily Zaburdaev