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The co-evolution of network topology and dynamics is studied in an evolutionary Boolean network model that is a simple model of gene regulatory network. We find that a critical state emerges spontaneously resulting from interplay between…

Statistical Mechanics · Physics 2007-05-23 Min Liu , Kevin E. Bassler

The dynamics of noise-resilient Boolean networks with majority functions and diverse topologies is investigated. A wide class of possible topological configurations is parametrized as a stochastic blockmodel. For this class of networks, the…

Disordered Systems and Neural Networks · Physics 2012-01-11 Tiago P. Peixoto

Distributed configuration management is imperative for wireless infrastructureless networks where each node adjusts locally its physical and logical configuration through information exchange with neighbors. Two issues remain open. The…

Distributed, Parallel, and Cluster Computing · Computer Science 2008-09-12 Sung-eok Jeon , Chunayi Ji

Synchronization and resonance on networks are some of the most remarkable collective dynamical phenomena. The network topology, or the nature and distribution of the connections within an ensemble of coupled oscillators, plays a crucial…

Dynamical Systems · Mathematics 2023-03-31 Paolo Bartesaghi

Neuronal networks constitute a special class of dynamical systems, as they are formed by individual geometrical components, namely the neurons. In the existing literature, relatively little attention has been given to the influence of…

Neurons and Cognition · Quantitative Biology 2015-05-13 Sebastian Ahnert , Luciano da Fontoura Costa

Many real world complex systems such as infrastructure, communication and transportation networks are embedded in space, where entities of one system may depend on entities of other systems. These systems are subject to geographically…

Physics and Society · Physics 2015-03-13 Yehiel Berezin , Amir Bashan , Michael M. Danziger , Daqing Li , Shlomo Havlin

Many real world networks are characterized by adaptive changes in their topology depending on the dynamic state of their nodes. Here we study epidemic dynamics in an adaptive network, where susceptibles are able to avoid contact with…

Populations and Evolution · Quantitative Biology 2007-05-23 Thilo Gross , Carlos Dommar D'Lima , Bernd Blasius

Correlations may affect propagation processes on complex networks. To analyze their effect, it is useful to build ensembles of networks constrained to have a given value of a structural measure, such as the degree-degree correlation $r$,…

Statistical Mechanics · Physics 2013-04-09 Marlon Ramos , Celia Anteneodo

It is commonly believed that scale-free networks are robust to massive numbers of random node deletions. For example, Cohen et al. study scale-free networks including some which approximate the measured degree distribution of the Internet.…

Networking and Internet Architecture · Computer Science 2007-05-23 Hamilton Link , Randall A. LaViolette , Jared Saia , Terran Lane

Boolean networks have been used successfully in modeling biological networks and provide a good framework for theoretical analysis. However, the analysis of large networks is not trivial. In order to simplify the analysis of such networks,…

Molecular Networks · Quantitative Biology 2013-11-29 Alan Veliz-Cuba , Reinhard Laubenbacher , Boris Aguilar

Most social, technological and biological networks are embedded in a finite dimensional space, and the distance between two nodes influences the likelihood that they link to each other. Indeed, in social systems, the chance that two…

Physics and Society · Physics 2018-06-27 Paul Balister , Chaoming Song , Oliver Riordan , Bela Bollobas , Albert-Laszlo Barabasi

Spatial networks, in which nodes and edges are embedded in space, play a vital role in the study of complex systems. For example, many social networks attach geo-location information to each user, allowing the study of not only topological…

Social and Information Networks · Computer Science 2014-03-05 Nicholas D. Larusso , Brian E. Ruttenberg , Ambuj Singh

We investigate disease spreading on eight empirical data sets of human contacts (mostly proximity networks recording who is close to whom, at what time). We compare three levels of representations of these data sets: temporal networks,…

Populations and Evolution · Quantitative Biology 2016-09-14 Petter Holme

This paper develops strategic foundations for an important statistical model of random networks with heterogeneous expected degrees. Based on this, we show how social networking services that subtly alter the costs and indirect benefits of…

Applications · Statistics 2010-04-09 Benjamin Golub , Yair Livne

Scaling behavior of scale-free evolving networks arising in communications, citations, collaborations, etc. areas is studied. We derive universal scaling relations describing properties of such networks and indicate limits of their…

Condensed Matter · Physics 2009-10-31 S. N. Dorogovtsev , J. F. F. Mendes

Like other social animals and biological systems, human groups constantly exchange information. Network models provide a way of quantifying this process by representing the pathways of information propagation between individuals. Existing…

Social and Information Networks · Computer Science 2024-10-18 Niek Kerssies , Jose Segovia Martin , James Winters

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

Biological Physics · Physics 2015-05-13 Sitabhra Sinha

With increasing threats by large attacks or disasters, the time has come to reconstruct network infrastructures such as communication or transportation systems rather than to recover them as before in case of accidents, because many real…

Physics and Society · Physics 2020-09-03 Yukio Hayashi , Atsushi Tanaka , Jun Matsukubo

We investigate small-world networks from the point of view of their origin. While the characteristics of small-world networks are now fairly well understood, there is as yet no work on what drives the emergence of such a network…

Disordered Systems and Neural Networks · Physics 2009-10-31 Nisha Mathias , Venkatesh Gopal

Transport in complex networks can describe a variety of natural and human-engineered processes including biological, societal and technological ones. However, how the properties of the source and drain nodes can affect transport subject to…

Statistical Mechanics · Physics 2023-10-19 Geoffroy Berthelot , Liubov Tupikina , Min-Yeong Kang , Jérôme Dedecker , Denis S. Grebenkov