English
Related papers

Related papers: Ratio control in a cascade model of cell different…

200 papers

The equation which describes a particle diffusing in a logarithmic potential arises in diverse physical problems such as momentum diffusion of atoms in optical traps, condensation processes, and denaturation of DNA molecules. A detailed…

Statistical Mechanics · Physics 2015-06-03 Ori Hirschberg , David Mukamel , Gunter M. Schütz

Time delays, modelling the process of intracellular gene expression, have been shown to have important impacts on the dynamics of pattern formation in reaction-diffusion systems. In particular, past work has shown that such time delays can…

Pattern Formation and Solitons · Physics 2022-06-28 Alec Sargood , Eamonn A. Gaffney , Andrew L. Krause

Transition from a split to a forward kinetic energy cascade system is explored in the context of rotating turbulence using direct numerical simulations with a three-dimensional isotropic random force uncorrelated with the velocity field.…

Fluid Dynamics · Physics 2019-05-15 Tiago Pestana , Stefan Hickel

We introduce a solvable model of randomly growing systems consisting of many independent subunits. Scaling relations and growth rate distributions in the limit of infinite subunits are analysed theoretically. Various types of scaling…

Physics and Society · Physics 2015-06-12 Misako Takayasu , Hayafumi Watanabe , Hideki Takayasu

We establish the existence of solutions to a class of non-linear stochastic differential equation of reaction-diffusion type in an infinite-dimensional space, with diffusion corresponding to a given transition kernel. The solution obtained…

Probability · Mathematics 2021-08-10 Conrado da Costa , Bernardo Freitas Paulo da Costa , Daniel Valesin

Turing inspired a computer metaphor of the mind and brain that has been handy and has spawned decades of empirical investigation, but he did much more and offered behavioral and cognitive sciences another metaphor--that of the cascade. The…

Neurons and Cognition · Quantitative Biology 2022-04-19 Damian G. Kelty-Stephen , Madhur Mangalam

In this paper, we address a distributed control problem for a system of partial differential equations describing the evolution of a tumor that takes the biological mechanism of chemotaxis into account. The system describing the evolution…

Optimization and Control · Mathematics 2023-09-19 Gianni Gilardi , Andrea Signori , Jürgen Sprekels

We present a method to control the two-dimensional shape of traveling wave solutions to reaction-diffusion systems, as e.g. interfaces and excitation pulses. Control signals that realize a pre-given wave shape are determined analytically…

Pattern Formation and Solitons · Physics 2014-12-15 Jakob Löber , Steffen Martens , Harald Engel

The study of reaction-diffusion systems on networks is of paramount relevance for the understanding of nonlinear processes in systems where the topology is intrinsically discrete, such as the brain. Until now reaction-diffusion systems have…

Pattern Formation and Solitons · Physics 2025-10-22 Lorenzo Giambagli , Lucille Calmon , Riccardo Muolo , Timoteo Carletti , Ginestra Bianconi

Cell growth in size is a complex process coordinated by intrinsic and environmental signals. In a recent work [Tzur et al., Science, 2009, 325:167-171], size distributions in an exponentially growing population of mammalian cells were used…

Cell Behavior · Quantitative Biology 2015-06-16 Yucheng Hu , Tianqi Zhu

Turing patterns are a central paradigm for describing spatial patterns in nature. The corresponding theory of reaction-diffusion dynamics combines ideal diffusion with nonlinear reactions, resulting in patterns when species diffuse at…

Biological Physics · Physics 2026-01-28 Cathelijne ter Burg , David Zwicker

Many cellular components are present in such low numbers that individual stochastic production and degradation events lead to significant fluctuations in molecular abundances. Although feedback control can, in principle, suppress such…

Molecular Networks · Quantitative Biology 2025-12-25 Ryan Ripsman , Brayden Kell , Andreas Hilfinger

For delayed reaction-diffusion Schnakenberg systems with Neumann boundary conditions, critical conditions for Turing instability are derived, which are necessary and sufficient. And existence conditions for Turing, Hopf and Turing-Hopf…

Dynamical Systems · Mathematics 2020-01-08 Weihua Jiang , Hongbin Wang , Xun Cao

Spatial self-organization emerges in distributed systems exhibiting local interactions when nonlinearities and the appropriate propagation of signals are at work. These kinds of phenomena can be modeled with different frameworks, typically…

Cell Behavior · Quantitative Biology 2016-11-23 Adriano Bonforti , Salva Duran-Nebreda , Raul Montañez , Ricard Solé

Interfaces in tissues are ubiquitous, both between tissue and environment as well as between populations of different cell types. The propagation of an interface can be driven mechanically. % e.g. by a difference in the respective…

Tissues and Organs · Quantitative Biology 2024-06-03 Tobias Büscher , Angel L. Diez , Gerhard Gompper , Jens Elgeti

A ternary reaction-diffusion model for early HIV infection dynamics, incorporating logistic growth of target cells, is introduced. According to in vitro and in vivo studies, random movement of target cells, infected cells, and virions and a…

Populations and Evolution · Quantitative Biology 2024-10-21 Florinda Capone , Roberta De Luca , Vincenzo Luongo

Multipotent stem or progenitor cells undergo a sequential series of binary fate decisions, which ultimately generate the diversity of differentiated cells. Efforts to understand cell fate control have focused on simple gene regulatory…

Molecular Networks · Quantitative Biology 2009-09-15 David V. Foster , Jacob G. Foster , Sui Huang , Stuart A. Kauffman

We study instabilities and pattern formation in reaction-diffusion layers that are diffusively coupled. For two-layer systems of identical two-component reactions, we analyze the stability of homogeneous steady states by exploiting the…

Pattern Formation and Solitons · Physics 2015-06-03 Anne J. Catlla , Amelia McNamara , Chad M. Topaz

The statistical mechanical description of two-dimensional inviscid fluid turbulence is reconsidered. Using this description, we make predictions about turbulent flow in a rapidly rotating laboratory annulus. Measurements on the continuously…

Soft Condensed Matter · Physics 2009-11-11 Sunghwan Jung , P. J. Morrison , Harry L. Swinney

We analyzed conditions for Hopf and Turing instabilities to occur in two-component fractional reaction-diffusion systems. We showed that the eigenvalue spectrum and fractional derivative order mainly determine the type of instability and…

Adaptation and Self-Organizing Systems · Physics 2009-12-09 B. Y. Datsko , V. V. Gafiychuk