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Related papers: Distributed Agreement in Tile Self-Assembly

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Self-assembly, the process by which interacting components form well-defined and often intricate structures, is typically thought of as a spontaneous process arising from equilibrium dynamics. When a system is driven by external…

Statistical Mechanics · Physics 2021-11-12 Shriram Chennakesavalu , Grant M. Rotskoff

In this paper we propose and analyze a distributed algorithm for achieving globally optimal decisions, either estimation or detection, through a self-synchronization mechanism among linearly coupled integrators initialized with local…

Information Theory · Computer Science 2016-11-15 Gesualdo Scutari , Sergio Barbarossa , Loreto Pescosolido

Traditionally, distributed and parallel transactional systems have been studied in isolation, as they targeted different applications and experienced different bottlenecks. However, modern high-bandwidth networks have made the study of…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-09 Naama Ben-David , Gal Sela , Adriana Szekeres

Tiled spatial architectures have proved to be an effective solution to build large-scale DNN accelerators. In particular, interconnections between tiles are critical for high performance in these tile-based architectures. In this work, we…

Hardware Architecture · Computer Science 2025-02-19 Zhao Wang , Jingchen Zhu , Zhe Zhou , Guangyu Sun

Decentralized optimization is well studied for smooth unconstrained problems. However, constrained problems or problems with composite terms are an open direction for research. We study structured (or composite) optimization problems, where…

Optimization and Control · Mathematics 2023-04-10 Alexander Rogozin , Anton Novitskii , Alexander Gasnikov

A natural way to measure the power of a distributed-computing model is to characterize the set of tasks that can be solved in it. %the model. In general, however, the question of whether a given task can be solved in a given model is…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-23 Carole Delporte-Gallet , Hugues Fauconnier , Eli Gafni , Petr Kuznetsov

Self-assembly processes in biological and synthetic biomolecular systems are often governed by the spatial separation of biochemical processes. While previous work has focused on optimizing self-assembly through fine-tuned reaction…

Biological Physics · Physics 2026-02-17 Severin Angerpointner , Richard Swiderski , Erwin Frey

Fault tolerance in multi-core architecture has attracted attention of research community for the past 20 years. Rapid improvements in the CMOS technology resulted in exponential growth of transistor density. It resulted in increased…

Hardware Architecture · Computer Science 2022-01-03 Shashikiran Venkatesha , Ranjani Parthasarathi

We prove that by successively combining subassemblies, we can achieve sublinear construction times for "staged" assembly of micro-scale objects from a large number of tiny particles, for vast classes of shapes; this is a significant advance…

Computational Geometry · Computer Science 2018-07-05 Arne Schmidt , Sheryl Manzoor , Li Huang , Aaron T. Becker , Sándor P. Fekete

Self-stabilization is a versatile fault-tolerance approach that characterizes the ability of a system to eventually resume a correct behavior after any finite number of transient faults. In this paper, we propose a self-stabilizing reset…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-23 Stéphane Devismes , Colette Johnen

Agreement among a set of processes and in the presence of partial failures is one of the fundamental problems of distributed systems. In the most general case, many decisions must be agreed upon over the lifetime of a system with…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-01 Seif Haridi , Lars Kroll , Paris Carbone

An arbitrarily reliable quantum computer can be efficiently constructed from noisy components using a recursive simulation procedure, provided that those components fail with probability less than the fault-tolerance threshold. Recent…

Quantum Physics · Physics 2013-04-03 K. M. Svore , A. W. Cross , I. L. Chuang , A. V. Aho

Winfree (1998) showed that discrete Sierpinski triangles can self-assemble in the Tile Assembly Model. A striking molecular realization of this self-assembly, using DNA tiles a few nanometers long and verifying the results by atomic-force…

Discrete Mathematics · Computer Science 2009-03-11 James I. Lathrop , Jack H. Lutz , Scott M. Summers

We study two fundamental problems of distributed computing, consensus and approximate agreement, through a novel approach for proving lower bounds and impossibility results, that we call the asynchronous speedup theorem. For a given…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-11-21 Pierre Fraigniaud , Ami Paz , Sergio Rajsbaum

We develop deterministic algorithms for the problems of consensus, gossiping and checkpointing with nodes prone to failing. Distributed systems are modeled as synchronous complete networks. Failures are represented either as crashes or…

Data Structures and Algorithms · Computer Science 2023-05-22 Bogdan S. Chlebus , Dariusz R. Kowalski , Jan Olkowski

This paper develops methods of distributed Bayesian hypothesis tests for fault detection and diagnosis that are based on belief propagation and optimization in graphical models. The main challenges in developing distributed statistical…

Systems and Control · Computer Science 2015-01-20 Kwang-Ki K. Kim

Algorithms to solve fault-tolerant consensus in asynchronous systems often rely on primitives such as crusader agreement, adopt-commit, and graded broadcast, which provide weaker agreement properties than consensus. Although these…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-10 Hagit Attiya , Jennifer L. Welch

This paper considers the problem of dynamic average consensus algorithm design for a group of communicating agents. This problem consists of designing a distributed algorithm that enables a group of agents with communication and computation…

Systems and Control · Computer Science 2018-11-27 Solmaz S. Kia , Bryan Van Scoy , Jorge Cortes , Randy A. Freeman , Kevin M. Lynch , Sonia Martinez

We present an active tile assembly model which extends Winfree's abstract tile assembly model to tiles that are capable of transmitting and receiving binding site activation signals. In addition, we introduce a mathematical framework to…

Emerging Technologies · Computer Science 2012-11-14 Natasha Jonoska , Daria Karpenko

The inverse problem of designing component interactions to target emergent structure is fundamental to numerous applications in biotechnology, materials science, and statistical physics. Equally important is the inverse problem of designing…

Computational Physics · Physics 2020-11-20 Carl P. Goodrich , Ella M. King , Samuel S. Schoenholz , Ekin D. Cubuk , Michael Brenner