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Graphs are mathematical tools that can be used to represent complex real-world interconnected systems, such as financial markets and social networks. Hence, machine learning (ML) over graphs has attracted significant attention recently.…

Machine Learning · Computer Science 2023-10-24 O. Deniz Kose , Yanning Shen , Gonzalo Mateos

In this paper, we introduce a graph matching method that can account for constraints of arbitrary order, with arbitrary potential functions. Unlike previous decomposition approaches that rely on the graph structures, we introduce a…

Computer Vision and Pattern Recognition · Computer Science 2018-02-26 D. Khuê Lê-Huu , Nikos Paragios

Graph transformation is the rule-based modification of graphs, and is a discipline dating back to the 1970s. In general, to match the left-hand graph of a fixed rule within a host graph requires polynomial time, but to improve matching…

Logic in Computer Science · Computer Science 2021-01-05 Graham Campbell , Detlef Plump

In recent years, Graph Neural Networks (GNNs) have been utilized for various applications ranging from drug discovery to network design and social networks. In many applications, it is impossible to observe some properties of the graph…

Machine Learning · Computer Science 2025-03-12 Moshe Eliasof , Md Shahriar Rahim Siddiqui , Carola-Bibiane Schönlieb , Eldad Haber

In this paper, we derive nearly tight probabilistic norm bounds for a class of random matrices we call graph matrices. While the classical case of symmetric matrices with independent random entries (Wigner's matrices) is a special case, in…

Combinatorics · Mathematics 2021-04-30 Kwangjun Ahn , Dhruv Medarametla , Aaron Potechin

Modeling molecules as undirected graphs and chemical reactions as graph rewriting operations is a natural and convenient approach tom odeling chemistry. Graph grammar rules are most naturally employed to model elementary reactions like…

Discrete Mathematics · Computer Science 2012-08-17 Jakob L. Andersen , Christoph Flamm , Daniel Merkle , Peter F. Stadler

Machine learning techniques have recently been adopted in various applications in medicine, biology, chemistry, and material engineering. An important task is to predict the properties of molecules, which serves as the main subroutine in…

Machine Learning · Computer Science 2019-11-12 Shengchao Liu , Mehmet Furkan Demirel , Yingyu Liang

The problem of finding the missing values of a matrix given a few of its entries, called matrix completion, has gathered a lot of attention in the recent years. Although the problem under the standard low rank assumption is NP-hard,…

Machine Learning · Computer Science 2014-12-01 Vassilis Kalofolias , Xavier Bresson , Michael Bronstein , Pierre Vandergheynst

We tackle the problem of attributed graph transformations and propose a new algorithmic approach for defining parallel graph transformations allowing overlaps. We start by introducing some abstract operations over graph structures. Then, we…

Logic in Computer Science · Computer Science 2018-08-10 Thierry Boy de la Tour , Rachid Echahed

Graph is an important data representation which appears in a wide diversity of real-world scenarios. Effective graph analytics provides users a deeper understanding of what is behind the data, and thus can benefit a lot of useful…

Artificial Intelligence · Computer Science 2018-02-05 Hongyun Cai , Vincent W. Zheng , Kevin Chen-Chuan Chang

In the talk at the workshop my aim was to demonstrate the usefulness of graph techniques for tackling problems that have been studied predominantly as problems on the term level: increasing sharing in functional programs, and addressing…

Logic in Computer Science · Computer Science 2019-02-07 Clemens Grabmayer

Graph transformation systems have the potential to be realistic models of chemistry, provided a comprehensive collection of reaction rules can be extracted from the body of chemical knowledge. A first key step for rule learning is the…

Discrete Mathematics · Computer Science 2016-04-22 Christoph Flamm , Daniel Merkle , Peter F. Stadler , Uffe Thorsen

In this paper, we consider the setting of graph-structured data that evolves as a result of operations carried out by users or applications. We study different reasoning problems, which range from ensuring the satisfaction of a given set of…

Artificial Intelligence · Computer Science 2014-05-30 Shqiponja Ahmetaj , Diego Calvanese , Magdalena Ortiz , Mantas Simkus

This paper formulates a novel problem on graphs: find the minimal subset of edges in a fully connected graph, such that the resulting graph contains all spanning trees for a set of specifed sub-graphs. This formulation is motivated by an…

Discrete Mathematics · Computer Science 2017-07-18 Nicholas Harvey , Vahab Mirrokni , David Karger , Virginia Savova , Leonid Peshkin

We introduce a novel model-theoretic framework inspired from graph modification and based on the interplay between model theory and algorithmic graph minors. The core of our framework is a new compound logic operating with two types of…

Data Structures and Algorithms · Computer Science 2022-11-07 Fedor V. Fomin , Petr A. Golovach , Ignasi Sau , Giannos Stamoulis , Dimitrios M. Thilikos

We introduce Clique Matrices as an alternative representation of undirected graphs, being a generalisation of the incidence matrix representation. Here we use clique matrices to decompose a graph into a set of possibly overlapping clusters,…

Discrete Mathematics · Computer Science 2012-06-18 David Barber

The rules in a shape grammar apply in terms of embedding to take advantage of the parts that emerge visually in the appearance of shapes. While the shapes are kept unanalyzed as a computation moves forward, part-structures for shapes can be…

Formal Languages and Automata Theory · Computer Science 2022-03-15 Alexandros Haridis , George Stiny

We study a general class of recurrence relations that appear in the application of a matrix diagonalization procedure. We find general closed formula and determine analytical properties of the solutions. We finally apply these findings in…

Combinatorics · Mathematics 2025-07-02 Elismar R. Oliveira , Vilmar Trevisan

We introduce a new class of graph transformation systems in which rewrite rules can be guarded by universally quantified conditions on the neighbourhood of nodes. These conditions are defined via special graph patterns which may be…

Logic in Computer Science · Computer Science 2014-07-21 Giorgio Delzanno , Jan Stückrath

We present a form of algebraic reasoning for computational objects which are expressed as graphs. Edges describe the flow of data between primitive operations which are represented by vertices. These graphs have an interface made of…

Logic in Computer Science · Computer Science 2010-07-23 Lucas Dixon , Ross Duncan , Aleks Kissinger