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Mathematical models and algorithms are an essential part of mathematical research data, as they are epistemically grounding numerical data. In order to represent models and algorithms as well as their relationship semantically to make this…

The flexibility and effectiveness of message passing based graph neural networks (GNNs) induced considerable advances in deep learning on graph-structured data. In such approaches, GNNs recursively update node representations based on their…

Machine Learning · Computer Science 2023-05-04 Yeskendir Koishekenov , Erik J. Bekkers

Directed mixed graphs permit directed and bidirected edges between any two vertices. They were first considered in the path analysis developed by Sewall Wright and play an essential role in statistical modeling. We introduce a matrix…

Statistics Theory · Mathematics 2024-07-23 Qingyuan Zhao

The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

Machine Learning · Computer Science 2024-02-13 Lorenzo Giusti

The criteria for determining graph isomorphism are crucial for solving graph isomorphism problems. The necessary condition is that two isomorphic graphs possess invariants, but their function can only be used to filtrate and subdivide…

Graphics · Computer Science 2025-08-19 Chuanfu Hu , Aimin Hou

Current directed graph embedding methods build upon undirected techniques but often inadequately capture directed edge information, leading to challenges such as: (1) Suboptimal representations for nodes with low in/out-degrees, due to the…

Machine Learning · Computer Science 2024-07-22 Zhaoru Ke , Hang Yu , Jianguo Li , Haipeng Zhang

Addressing the interpretability problem of NMF on Boolean data, Boolean Matrix Factorization (BMF) uses Boolean algebra to decompose the input into low-rank Boolean factor matrices. These matrices are highly interpretable and very useful in…

Machine Learning · Computer Science 2023-07-18 Sebastian Dalleiger , Jilles Vreeken

In recent years it has become popular to study dynamic problems in a sensitivity setting: Instead of allowing for an arbitrary sequence of updates, the sensitivity model only allows to apply batch updates of small size to the original input…

Data Structures and Algorithms · Computer Science 2017-03-07 Monika Henzinger , Andrea Lincoln , Stefan Neumann , Virginia Vassilevska Williams

In this letter, we consider the implementation problem of distributed graph filters, where each node only has access to the signals of the current and its neighboring nodes. By using Gaussian elimination, we show that as long as the graph…

Signal Processing · Electrical Eng. & Systems 2019-09-12 Samuel Cheng

Graphs, as a relational data structure, have been widely used for various application scenarios, like molecule design and recommender systems. Recently, large language models (LLMs) are reorganizing in the AI community for their expected…

Artificial Intelligence · Computer Science 2025-02-19 Dongqi Fu , Liri Fang , Zihao Li , Hanghang Tong , Vetle I. Torvik , Jingrui He

Consider a directed or an undirected graph with integral edge weights from the set [-W, W], that does not contain negative weight cycles. In this paper, we introduce a general framework for solving problems on such graphs using matrix…

Data Structures and Algorithms · Computer Science 2012-08-20 Marek Cygan , Harold N. Gabow , Piotr Sankowski

Graphs are a powerful tool for representing and analyzing unstructured, non-Euclidean data ubiquitous in the healthcare domain. Two prominent examples are molecule property prediction and brain connectome analysis. Importantly, recent works…

Machine Learning · Computer Science 2022-04-04 Kamilia Mullakaeva , Luca Cosmo , Anees Kazi , Seyed-Ahmad Ahmadi , Nassir Navab , Michael M. Bronstein

We generalize classical results in spectral graph theory and linear algebra more broadly, from the case where the underlying matrix is Hermitian to the case where it is non-Hermitian. New admissibility conditions are introduced to replace…

Spectral Theory · Mathematics 2019-05-21 Edinah K. Gnang , James M. Murphy

Automata networks are a versatile model of finite discrete dynamical systems composed of interacting entities (the automata), able to embed any directed graph as a dynamics on its space of configurations (the set of vertices, representing…

Discrete Mathematics · Computer Science 2025-09-24 Aliénor Goubault-Larrecq , Kévin Perrot

Graph-based text representation focuses on how text documents are represented as graphs for exploiting dependency information between tokens and documents within a corpus. Despite the increasing interest in graph representation learning,…

Computation and Language · Computer Science 2022-10-13 Wenzhe Li , Nikolaos Aletras

We introduce and study a mathematical framework for a broad class of regularization functionals for ill-posed inverse problems: Regularization Graphs. Regularization graphs allow to construct functionals using as building blocks linear…

Optimization and Control · Mathematics 2022-09-28 Kristian Bredies , Marcello Carioni , Martin Holler

With the advances of data-driven machine learning research, a wide variety of prediction problems have been tackled. It has become critical to explore how machine learning and specifically deep learning methods can be exploited to analyse…

Machine Learning · Computer Science 2021-11-09 David Ahmedt-Aristizabal , Mohammad Ali Armin , Simon Denman , Clinton Fookes , Lars Petersson

We describe a graph-based neural acceleration technique for nonnegative matrix factorization that builds upon a connection between matrices and bipartite graphs that is well-known in certain fields, e.g., sparse linear algebra, but has not…

Machine Learning · Computer Science 2022-02-02 Jens Sjölund , Maria Bånkestad

In graph modification problems, one is given a graph G and the goal is to apply a minimum number of modification operations (such as edge deletions) to G such that the resulting graph fulfills a certain property. For example, the Cluster…

Data Structures and Algorithms · Computer Science 2016-06-13 Christian Komusiewicz , André Nichterlein , Rolf Niedermeier

The paper deals with the interpretability of Graph Neural Networks in the context of Boolean Satisfiability. The goal is to demystify the internal workings of these models and provide insightful perspectives into their decision-making…

Machine Learning · Computer Science 2024-08-29 Jan Hůla , David Mojžíšek , Mikoláš Janota
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