Related papers: A Polynomial Kernel For Multicut In Trees

Packing graphs is a combinatorial problem where several given graphs are being mapped into a common host graph such that every edge is used at most once. In the planar tree packing problem we are given two trees T1 and T2 on n vertices and…

For a labelled tree on the vertex set $[n]:=\{1,2,..., n\}$, define the direction of each edge $ij$ to be $i\to j$ if $i<j$. The indegree sequence of $T$ can be considered as a partition $\lambda \vdash n-1$. The enumeration of trees with a…

We study the problem of finding small trees. Classical network design problems are considered with the additional constraint that only a specified number $k$ of nodes are required to be connected in the solution. A prototypical example is…

For a fixed graph $H$, the $H$-free-editing problem asks whether we can modify a given graph $G$ by adding or deleting at most $k$ edges such that the resulting graph does not contain $H$ as an induced subgraph. The problem is known to be…

Phylogenetic invariants are certain polynomials in the joint probability distribution of a Markov model on a phylogenetic tree. Such polynomials are of theoretical interest in the field of algebraic statistics and they are also of practical…

We consider the following basic problem in phylogenetic tree construction. Let $\mathcal{P} = \{T_1, \ldots, T_k\}$ be a collection of rooted phylogenetic trees over various subsets of a set of species. The tree compatibility problem asks…

We consider the polyhedral properties of two spanning tree problems with additional constraints. In the first problem, it is required to find a tree with a minimum sum of edge weights among all spanning trees with the number of leaves less…

Given a graph and two integers $k$ and $\ell$, Partial Vertex Cover asks for a set of at most $k$ vertices whose deletion results in a graph with at most $\ell$ edges. Based on the expansion lemma, we provide a problem kernel with $(\ell +…

Given an undirected graph $G$, a collection $\{(s_1,t_1),..., (s_k,t_k)\}$ of pairs of vertices, and an integer $p$, the Edge Multicut problem ask if there is a set $S$ of at most $p$ edges such that the removal of $S$ disconnects every…

We give closed form expressions for the numbers of multi-rooted plane trees with specified degrees of root vertices. This results in an infinite number of integer sequences some of which are known to have an alternative interpretation. We…

In the Selective Coloring problem, we are given an integer $k$, a graph $G$, and a partition of $V(G)$ into $p$ parts, and the goal is to decide whether or not we can pick exactly one vertex of each part and obtain a $k$-colorable induced…

We consider a variant of treewidth that we call clique-partitioned treewidth in which each bag is partitioned into cliques. This is motivated by the recent development of FPT-algorithms based on similar parameters for various problems. With…

We study the CONNECTED \eta-TREEDEPTH DELETION problem where the input instance is an undireted graph G = (V, E) and an integer k. The objective is to decide if G has a set S \subseteq V(G) of at most k vertices such that G - S has…

In this paper, we propose the distributed tree kernels (DTK) as a novel method to reduce time and space complexity of tree kernels. Using a linear complexity algorithm to compute vectors for trees, we embed feature spaces of tree fragments…

Compatibility of unrooted phylogenetic trees is a well studied problem in phylogenetics. It asks to determine whether for a set of k input trees there exists a larger tree (called a supertree) that contains the topologies of all k input…

Evaluating a polynomial on a set of points is a fundamental task in computer algebra. In this work, we revisit a particular variant called trimmed multipoint evaluation: given an $n$-variate polynomial with bounded individual degree $d$ and…

We provide a $O(k^2 \mathrm{log} k)$ vertex kernel for cograph edge editing. This improves a cubic kernel found by Guillemot, Havet, Paul and Perez [1] which involved four reduction rules. We generalize one of their rules, based on packing…

The degree chromatic polynomial $Pm(G,k)$ of a graph $G$ counts the number of $k$-colorings in which no vertex has $m$ adjacent vertices of its same color. We prove Humpert and Martin's conjecture on the leading terms of the degree…

Imagine being able to ask questions to a black box model such as "Which adversarial examples exist?", "Does a specific attribute have a disproportionate effect on the model's prediction?" or "What kind of predictions could possibly be made…

Let $G = (V, E)$ be an undirected graph and let $B \subseteq V \times V$ be a set of terminal pairs. A node/edge multicut is a subset of vertices/edges of $G$ whose removal destroys all the paths between every terminal pair in $B$. The…