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In a quasi-1D thermal convective system consisting of a large array of nonlinearly coupled oscillators, clustering is the way to achieve a regime of mostly antiphase synchronized oscillators. This regime is characterized by a spatiotemporal…

Chaotic Dynamics · Physics 2011-03-10 M. A. Miranda , J. Burguete

We introduce a system of pulse coupled oscillators that can change both their phases and frequencies; and prove that when there is a separation of time scales between phase and frequency adjustment the system converges to exact synchrony on…

Neurons and Cognition · Quantitative Biology 2015-06-18 Joel Nishimura

Delay is an inherent feature of genetic regulatory networks. It represents the time required for the assembly of functional regulator proteins. The protein production process is complex, as it includes transcription, translocation,…

Subcellular Processes · Quantitative Biology 2025-12-29 Sean Campbell , Courtney C. White , Amanda M. Alexander , William Ott

The dynamics of three mutually coupled cortical neurons with time delays in the coupling are explored numerically and analytically. The neurons are coupled in a line, with the middle neuron sending a somewhat stronger projection to the…

Chaotic Dynamics · Physics 2011-01-25 Alexandra S. Landsman , Ira B. Schwartz

Clock synchronization is a widely discussed topic in the engineering literature. Ensuring that individual clocks are closely aligned is important in network systems, since the correct timing of various events in a network is usually…

Systems and Control · Computer Science 2017-04-25 Timothy Anglea , Yongqiang Wang

We argue that in a large class of disordered quantum many-body systems, the late time dynamics of time-dependent correlation functions is captured by random matrix theory, specifically the energy eigenvalue statistics of the corresponding…

High Energy Physics - Theory · Physics 2021-01-14 Jordan Cotler , Nicholas Hunter-Jones

The collective frequency that emerges from synchronized neuronal populations--the network resonance--shows a systematic relationship with brain size: whole-brain's large networks oscillate slowly, whereas finer parcellations of fixed volume…

Neurons and Cognition · Quantitative Biology 2026-03-04 Felipe A. Torres , Alejandro Weinstein , Jesus M. Cortes , Wael El-Deredy

One of the most salient spatio-temporal patterns in population ecology is the synchronization of fluctuating local populations across vast spatial extent. Synchronization of abundance has been widely observed across a range of spatial…

Populations and Evolution · Quantitative Biology 2017-06-01 Emily Wall , Frederic Guichard , Antony R. Humphries

We consider a general swarm model of self-propelling agents interacting through a pairwise potential in the presence of noise and communication time delay. Previous work [Phys. Rev. E 77, 035203(R) (2008)] has shown that a communication…

Adaptation and Self-Organizing Systems · Physics 2012-05-02 Luis Mier-y-Teran-Romero , Eric Forgoston , Ira B. Schwartz

Entrainment experiments on the vertebrate segmentation clock have revealed that embryonic oscillators actively change their internal frequency to adapt to the driving signal. This is neither consistent with a one-dimensional clock model nor…

Biological Physics · Physics 2024-08-27 Christian Mauffette Denis , Paul François

Using a stochastic individual-based modelling approach, we examine the role that Delta-Notch signalling plays in the regulation of a robust and reliable somite segmentation clock. We find that not only can Delta-Notch signalling synchronise…

Subcellular Processes · Quantitative Biology 2019-11-28 Joseph W. Baron , Tobias Galla

Following a short report of our preliminary results [Phys. Rev. E 79, 055203(R) (2009)], we present a more detailed study of the effects of coupling delay in diffusively coupled phase oscillator populations. We find that coupling delay…

Adaptation and Self-Organizing Systems · Physics 2015-05-18 Jane H. Sheeba , V. K. Chandrasekar , M. Lakshmanan

We report a new experimental approach using an optoelectronic feedback loop to investigate the dynamics of oscillators coupled on large complex networks with arbitrary topology. Our implementation is based on a single optoelectronic…

Chaotic Dynamics · Physics 2018-01-17 Joseph D. Hart , Don C. Schmadel , Thomas E. Murphy , Rajarshi Roy

We investigate the effects of heterogeneous delays in the coupling of two excitable neural systems. Depending upon the coupling strengths and the time delays in the mutual and self-coupling, the compound system exhibits different types of…

Adaptation and Self-Organizing Systems · Physics 2015-06-05 Anastasiia Panchuk , David P. Rosin , Philipp Hövel , Eckehard Schöll

The mechanical properties of vertebrate bone are largely determined by a process which involves the complex interplay of three different cell types. This process is called {\it bone remodeling}, and occurs asynchronously at multiple sites…

Tissues and Organs · Quantitative Biology 2011-11-30 Marc Ryser , Svetlana V. Komarova , Nilima Nigam

Visual illusions provide a window into the mechanisms underlying visual processing, and dynamical neural circuit models offer a natural framework for proposing and testing theories of their emergence. We propose and analyze a delay-coupled…

Neurons and Cognition · Quantitative Biology 2026-01-28 Noah Parks , Zachary P Kilpatrick

The widespread development and use of neural networks have significantly enriched a wide range of computer algorithms and promise higher speed at lower cost. However, the imitation of neural networks by means of modern computing substrates…

Adaptation and Self-Organizing Systems · Physics 2024-08-28 Anna Zakharova , Vladimir V. Semenov

Algorithms for the synchronisation of clocks across networks are both common and important within distributed systems. We here address not only the formal modelling of these algorithms, but also the formal verification of their behaviour.…

Logic in Computer Science · Computer Science 2018-09-28 Paul Gainer , Sven Linker , Clare Dixon , Ullrich Hustadt , Michael Fisher

In-phase synchronization is a special case of synchronous behavior when coupled oscillators have the same phases for any time moments. Such behavior appears naturally for nearly identical coupled limit-cycle oscillators when the coupling…

Adaptation and Self-Organizing Systems · Physics 2019-09-24 Viktor Novičenko , Irmantas Ratas

Circadian clocks play a pivotal role in orchestrating numerous physiological and developmental events. Waveform shapes of the oscillations of protein abundances can be informative about the underlying biochemical processes of circadian…

Subcellular Processes · Quantitative Biology 2018-11-27 Hang-Hyun Jo , Yeon Jeong Kim , Jae Kyoung Kim , Mathias Foo , David E. Somers , Pan-Jun Kim