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In this study, we construct such systems with the Kuramoto model of globally coupled oscillators with time-delayed positive and negative couplings to explore the impact of coupling time delays in the collective frequency of synchronized…

Biological Physics · Physics 2024-08-13 Hui Wu , Mukesh Dhamala

In most vertebrate species, the body axis is generated by the formation of repeated transient structures called somites. This spatial periodicity in somitogenesis has been related to the temporally sustained oscillations in certain mRNAs…

Quantitative Methods · Quantitative Biology 2009-11-13 K. I. Mazzitello , C. M. Arizmendi , H. G. E. Hentschel

We study chimera states, which are partial synchronization patterns consisting of spatially coexisting domains of coherent (synchronized) and incoherent (desynchronized) dynamics, in ring networks of FitzHugh-Nagumo oscillators with fractal…

Adaptation and Self-Organizing Systems · Physics 2019-03-27 Jakub Sawicki , Iryna Omelchenko , Anna Zakharova , Eckehard Schöll

We study the effect of coupling delay in a regular network with a ring topology and in a more complex network with an all-to-all (global) topology in the presence of impurities (disorder). We find that the coupling delay is capable of…

Chaotic Dynamics · Physics 2011-12-26 D. V. Senthilkumar , R. Suresh , Jane H. Sheeba , M. Lakshmanan , J. Kurths

Oscillations represent a ubiquitous phenomenon in biological systems. The conventional models of biological periodic oscillations are usually proposed as interconnecting transcriptional feedback loops. Some specific proteins function as…

Pattern Formation and Solitons · Physics 2013-05-29 Yue Ma , Kenichi Yoshikawa

We investigate the influence of time-delayed coupling in a ring network of non-locally coupled Stuart-Landau oscillators upon chimera states, i.e., space-time patterns with coexisting partially coherent and partially incoherent domains. We…

Adaptation and Self-Organizing Systems · Physics 2017-05-03 Aleksandar Gjurchinovski , Eckehard Schöll , Anna Zakharova

We investigated the effect of time delays on phase configurations in a set of two-dimensional coupled phase oscillators. Each oscillator is allowed to interact with its neighbors located within a finite radius, which serves as a control…

Pattern Formation and Solitons · Physics 2009-11-07 Seong-Ok Jeong , Tae-Wook Ko , Hie-Tae Moon

We explore both analytically and numerically an ensemble of coupled phase-oscillators governed by a Kuramoto-type system of differential equations. However, we have included the effects of time-delay (due to finite signal-propagation…

Adaptation and Self-Organizing Systems · Physics 2015-06-16 Liam Timms , Lars Q. English

We study the synchronization phenomena in a system of globally coupled oscillators with time delay in the coupling. The self-consistency equations for the order parameter are derived, which depend explicitly on the amount of delay. Analysis…

Statistical Mechanics · Physics 2009-10-31 M. Y. Choi , H. J. Kim , D. Kim , H. Hong

The collective behavior of biological oscillators has been recognized as an important problem for several decades, but its control has come into limelight only recently. Much of the focus for control has been on desynchronization of an…

Adaptation and Self-Organizing Systems · Physics 2019-07-09 Bharat Monga , Jeff Moehlis

The production process of integrated electronic circuitry inherently leads to large heterogeneities on the component level. For electronic clock networks this implies detuned intrinsic frequencies and differences in coupling strength and…

Adaptation and Self-Organizing Systems · Physics 2019-09-04 Nirmal Punetha , Lucas Wetzel

Autonomous circadian clocks drive daily rhythms in physiology and behaviour. A network of coupled neurons, the suprachiasmatic nucleus (SCN), serves as a robust self-sustained circadian pacemaker. Synchronization of this timer to the…

Adaptation and Self-Organizing Systems · Physics 2015-05-28 G. Bordyugov , A. E. Granada , H. Herzel

Consider a distributed network on a finite simple graph $G=(V,E)$ with diameter $d$ and maximum degree $\Delta$, where each node has a phase oscillator revolving on $S^{1}=\mathbb{R}/\mathbb{Z}$ with unit speed. Pulse-coupling is a class of…

Optimization and Control · Mathematics 2018-01-25 Hanbaek Lyu

We consider an ensemble of globally coupled phase oscillators whose interaction is transmitted at finite speed. This introduces time delays, which make the spatial coordinates relevant in spite of the infinite range of the interaction. We…

Statistical Mechanics · Physics 2007-05-23 Damian H. Zanette

It is known from both theory and experiments that introducing time delays into the communication network of mobile-agent swarms produces coherent rotational patterns. Often such spatio-temporal rotations can be bistable with other swarming…

Adaptation and Self-Organizing Systems · Physics 2020-04-15 Jason Hindes , Victoria Edwards , Sayomi Kamimoto , Ioana Triandaf , Ira B. Schwartz

By means of numerical integration we investigate the coherent and incoherent phases in a generalized Kuramoto model of phase-coupled oscillators with distance-dependent delay. Preserving the topology of a complete graph, we arrange the…

Chaotic Dynamics · Physics 2010-08-04 Karol Trojanowski , Lech Longa

Dynamic mode decomposition (DMD) is a leading tool for equation-free analysis of high-dimensional dynamical systems from observations. In this work, we focus on a combination of delay-coordinates embedding and DMD, i.e., delay-coordinates…

Dynamical Systems · Mathematics 2022-12-21 Emil Bronstein , Aviad Wiegner , Doron Shilo , Ronen Talmon

DNA methylation is a primary layer of epigenetic modification that plays a pivotal role in the regulation of development, aging, and cancer. The concurrent activity of opposing enzymes that mediate DNA methylation and demethylation gives…

Biological Physics · Physics 2026-02-10 Fabrizio Olmeda , Misha Gupta , Onurcan Bektas , Steffen Rulands

Periodic forcing of nonlinear oscillators leads to a large number of dynamic behaviors. The coupling of the cell-cycle to the circadian clock provides a biological realization of such forcing. Using high throughput single-cell microscopy,…

We consider the effect of asymmetric temporal delays in a system of two coupled Hopfield neurons. For couplings of opposite signs, a limit cycle emerges via a supercritical Hopf bifurcation when the sum of the delays reaches a critical…

Biological Physics · Physics 2011-11-10 Sebastian F. Brandt , Axel Pelster , Ralf Wessel