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We define the harmonic evolution of states of a graph by iterative application of the harmonic operator (Laplacian over $Z_2$). This provides graphs with a new geometric context and leads to a new tool to analyze them. The digraphs of…

Combinatorics · Mathematics 2012-01-09 Jerzy Kocik

We use analytical methods to investigate cellular automata for traffic flow. Two different mean-field approaches are presented, which we call site-oriented and car-oriented, respectively. The car-oriented mean-field theory yields the exact…

Condensed Matter · Physics 2007-05-23 Andreas Schadschneider , Michael Schreckenberg

This paper considers a dynamic coverage problem for sensor networks that are sufficiently dense but not localized. Only a small fraction of sensors may be in an awake state at any given time. The goal is to find a decentralized protocol for…

Algebraic Topology · Mathematics 2012-10-19 Yiqing Cai , Robert Ghrist

We study cellular automata with respect to a new communication complexity problem: each of two players know half of some finite word, and must be able to tell whether the state of the central cell will follow a given evolution, by…

Formal Languages and Automata Theory · Computer Science 2011-02-18 Eric Goles , Pierre Guillon , Ivan Rapaport

Despite their topological complexity almost all functional properties of metabolic networks can be derived from steady-state dynamics. Indeed, many theoretical investigations (like flux-balance analysis) rely on extracting function from…

Molecular Networks · Quantitative Biology 2009-11-13 Carsten Marr , Mark Mueller-Linow , Marc-Thorsten Huett

Topological data analysis (TDA) detects geometric structure in biological data. However, many TDA algorithms are memory intensive and impractical for massive datasets. Here, we introduce a statistical protocol that reduces TDA's memory…

Quantitative Methods · Quantitative Biology 2025-09-05 Andrew J. Stier , Naichen Shi , Raed Al Kontar , Chad Giusti , Marc G. Berman

This study aims at finding a method for constructing molecular dynamics like models using the formalism of cellular automata for fast simulation of fluid dynamic systems (including compressible phenomena). In as much as the results…

comp-gas · Physics 2009-09-25 Himanshu Agrawal

This paper studies infinite graphs produced from a natural unfolding operation applied to finite graphs. Graphs produced via such operations are of finite degree and automatic over the unary alphabet (that is, they can be described by…

Logic · Mathematics 2008-09-22 Bakhadyr Khoussainov , Jiamou Liu , Mia Minnes

Cell complexes (CCs) are a higher-order network model deeply rooted in algebraic topology that has gained interest in signal processing and network science recently. However, while the processing of signals supported on CCs can be described…

Signal Processing · Electrical Eng. & Systems 2025-06-12 Josef Hoppe , Vincent P. Grande , Michael T. Schaub

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

In this work, we fully define the existing relationships between traditional optimality criteria and the connectivity of the underlying pose-graph in Active SLAM, characterizing, therefore, the connection between Graph Theory and the Theory…

Robotics · Computer Science 2022-04-25 Julio A. Placed , José A. Castellanos

Biomedical networks (or graphs) are universal descriptors for systems of interacting elements, from molecular interactions and disease co-morbidity to healthcare systems and scientific knowledge. Advances in artificial intelligence,…

Machine Learning · Computer Science 2025-02-07 Michelle M. Li , Kexin Huang , Marinka Zitnik

We determine the optimum topology of quasi-one dimensional nonlinear optical structures using generalized quantum graph models. Quantum graphs are relational graphs endowed with a metric and a multiparticle Hamiltonian acting on the edges,…

Quantum Physics · Physics 2015-06-19 Rick Lytel , Shoresh Shafei , Mark G. Kuzyk

In this paper, we demonstrate that considering experiments in a graph-theoretic manner allows us to exploit automorphisms of the graph to reduce the number of evaluations of candidate designs for those experiments, and thus find optimal…

Methodology · Statistics 2018-02-28 Ben M. Parker , Steven G Gilmour , Vasiliki Koutra

Cell complexes are topological spaces constructed from simple blocks called cells. They generalize graphs, simplicial complexes, and polyhedral complexes that form important domains for practical applications. They also provide a…

Machine Learning · Computer Science 2021-03-03 Mustafa Hajij , Kyle Istvan , Ghada Zamzmi

As graph representations of data emerge in multiple domains, data analysts need to be able to intelligently select among a magnitude of different data graphs based on the effects different graph operators have on them. Exhaustive execution…

Social and Information Networks · Computer Science 2018-08-21 Tasos Bakogiannis , Ioannis Giannakopoulos , Dimitrios Tsoumakos , Nectarios Koziris

We improve a recently proposed dynamically driven renormalization group algorithm for cellular automata systems with one absorbing state, introducing spatial correlations in the expression for the transition probabilities. We implement the…

Statistical Mechanics · Physics 2009-10-31 Roberto A. Monetti , Javier E. Satulovsky

Introduced the quantitative measure of the structural complexity of the graph (complex network, etc.) based on a procedure similar to the renormalization process, considering the difference between actual and averaged graph structures on…

Physics and Society · Physics 2024-06-05 A. A. Snarskii

Cellular automata provide a fascinating class of dynamical systems capable of diverse complex behavior. These include simplified models for many phenomena seen in nature. Among other things, they provide insight into self-organized…

High Energy Physics - Lattice · Physics 2008-02-03 Michael Creutz

We address the problem of identifying a graph structure from the observation of signals defined on its nodes. Fundamentally, the unknown graph encodes direct relationships between signal elements, which we aim to recover from observable…

Social and Information Networks · Computer Science 2016-08-11 Santiago Segarra , Antonio G. Marques , Gonzalo Mateos , Alejandro Ribeiro