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In vitro and in vivo spiking activity clearly differ. Whereas networks in vitro develop strong bursts separated by periods of very little spiking activity, in vivo cortical networks show continuous activity. This is puzzling considering…

Neurons and Cognition · Quantitative Biology 2018-07-24 Johannes Zierenberg , Jens Wilting , Viola Priesemann

Deep convolutional neural networks (CNNs) have structures that are loosely related to that of the primate visual cortex. Surprisingly, when these networks are trained for object classification, the activity of their early, intermediate, and…

Neurons and Cognition · Quantitative Biology 2016-10-18 Omid Rezai , Pinar Boyraz Jentsch , Bryan Tripp

The co-occurrence of action potentials of pairs of neurons within short time intervals is known since long. Such synchronous events can appear time-locked to the behavior of an animal and also theoretical considerations argue for a…

Neurons and Cognition · Quantitative Biology 2022-05-17 Moritz Helias , Tom Tetzlaff , Markus Diesmann

In vivo, neurons establish functional connections and preserve information along their synaptic pathways from one information processing stage to the next in a very efficient manner. Paired spiking (PS) enhancement plays a key role by…

Neurons and Cognition · Quantitative Biology 2015-11-02 Aurel Vasile Martiniuc , Victor Bocoş-Binţinţan , Rouhollah Habibey , Asiyeh Golabchi , Alois Knoll , Axel Blau

Neurons process sensory stimuli efficiently, showing sparse yet highly variable ensemble spiking activity involving structured higher-order interactions. Notably, while neural populations are mostly silent, they occasionally exhibit highly…

Neurons and Cognition · Quantitative Biology 2025-07-17 Ulises Rodríguez-Domínguez , Hideaki Shimazaki

Cortical activity in-vivo displays relaxational time scales much longer than the membrane time constant of the neurons or the deactivation time of ionotropic synaptic conductances. The mechanisms responsible for such slow dynamics are not…

Disordered Systems and Neural Networks · Physics 2025-08-07 Ferdinand Tixidre , Gianluigi Mongillo , Alessandro Torcini

We explore the interplay between the topological relevance of a neuron and its dynamical traces in experimental cultured neuronal networks. We monitor the growth and development of these networks to characterise the evolution of their…

Adaptation and Self-Organizing Systems · Physics 2023-07-14 A. Tlaie , L. M. Ballesteros-Esteban , I. Leyva , I. Sendina-Nadal

During organismal development, biochemical reaction networks sense and respond to mechanical forces to coordinate embryonic patterning with embryo morphogenesis. Factors such as cortical tension, cell density, and matrix mechanical…

The models in statistical physics such as an Ising model offer a convenient way to characterize stationary activity of neural populations. Such stationary activity of neurons may be expected for recordings from in vitro slices or…

Neurons and Cognition · Quantitative Biology 2017-05-05 Christian Donner , Klaus Obermayer , Hideaki Shimazaki

Neurons are spatially extended cells; different parts of a neuron have specific voltage dynamics. Important types of neurons even generate different spikes in different parts of the cell. Neurons' inputs are also often spatially…

Neurons and Cognition · Quantitative Biology 2026-02-06 Audrey O'Brien Teasley , Gabriel Koch Ocker

We study the statistics of spike trains of simultaneously recorded grid cells in freely behaving rats. We evaluate pairwise correlations between these cells and, using a generalized linear model (kinetic Ising model), study their functional…

Neurons and Cognition · Quantitative Biology 2015-06-19 Benjamin Dunn , Maria Mørreaunet , Yasser Roudi

Large-scale functional networks have been extensively studied using resting state functional magnetic resonance imaging. However, the pattern, organization, and function of fine-scale network activity remain largely unknown. Here we…

Neurons and Cognition · Quantitative Biology 2017-03-01 Kun-Han Lu , Jun Young Jeong , Haiguang Wen , Zhongming Liu

The paper examines the discrete-time dynamics of neuron models (of excitatory and inhibitory types) with piecewise linear activation functions, which are connected in a network. The properties of a pair of neurons (one excitatory and the…

chao-dyn · Physics 2007-05-23 Sitabhra Sinha

In principle, sparse neural networks should be significantly more efficient than traditional dense networks. Neurons in the brain exhibit two types of sparsity; they are sparsely interconnected and sparsely active. These two types of…

Machine Learning · Computer Science 2021-12-30 Kevin Lee Hunter , Lawrence Spracklen , Subutai Ahmad

One major challenge in neuroscience is the identification of interrelations between signals reflecting neural activity and how information processing occurs in the neural circuits. At the cellular and molecular level, mechanisms of signal…

Applications · Statistics 2019-09-27 Giacomo Aletti , Davide Lonardoni , Giovanni Naldi , Thierry Nieus

An essential step toward understanding neural circuits is linking their structure and their dynamics. In general, this relationship can be almost arbitrarily complex. Recent theoretical work has, however, begun to identify some broad…

Neurons and Cognition · Quantitative Biology 2017-03-10 Gabriel Koch Ocker , Yu Hu , Michael A. Buice , Brent Doiron , Krešimir Josić , Robert Rosenbaum , Eric Shea-Brown

Deep learning techniques are increasingly being adopted for classification tasks over the past decade, yet explaining how deep learning architectures can achieve state-of-the-art performance is still an elusive goal. While all the training…

Machine Learning · Computer Science 2021-10-12 Sakib Mostafa , Debajyoti Mondal

We study an abstracted model of neuronal activity via numerical simulation, and report spatiotemporal pattern formation and critical like dynamics. A population of pulse coupled, discretised, relaxation oscillators is simulated over…

Neurons and Cognition · Quantitative Biology 2019-04-24 Dionysios Georgiadis , Didier Sornette

Biological networks have so many possible states that exhaustive sampling is impossible. Successful analysis thus depends on simplifying hypotheses, but experiments on many systems hint that complicated, higher order interactions among…

Neurons and Cognition · Quantitative Biology 2009-11-11 Elad Schneidman , Michael J. Berry , Ronen Segev , William Bialek

From an enactive approach, some previous studies have demonstrated that social interaction plays a fundamental role in the dynamics of neural and behavioral complexity of embodied agents. In particular, it has been shown that agents with a…

Multiagent Systems · Computer Science 2020-11-04 Georgina Montserrat Reséndiz-Benhumea , Ekaterina Sangati , Tom Froese