English
Related papers

Related papers: A morphogenetic crop model for sugar-beet (Beta vu…

200 papers

Recent advancements in deep learning-based modeling of molecules promise to accelerate in silico drug discovery. A plethora of generative models is available, building molecules either atom-by-atom and bond-by-bond or fragment-by-fragment.…

From the past few years, due to advancements in technologies, the sedentary living style in urban areas is at its peak. This results in individuals getting a victim of obesity at an early age. There are various health impacts of obesity…

Machine Learning · Computer Science 2021-08-23 Satvik Garg , Pradyumn Pundir

Energy level diagrams in organic electronic devices play a crucial role in device performance and interpretation of device physics. In the case of organic solar cells, it has become routine to estimate the photovoltaic gap of the…

The carbon beams show more advantages on the biological properties compared with proton beams in radiation therapy. The carbon beam shows high linear energy transfer (LET) to medium and it increases the relative biological effectiveness…

Many living and non-living complex systems can be modeled and understood as collective systems made of heterogeneous components that self-organize and generate nontrivial morphological structures and behaviors. This chapter presents a brief…

Adaptation and Self-Organizing Systems · Physics 2018-01-09 Hiroki Sayama

Plants create sugar in the mesophyll cells of their leaves by photosynthesis. This sugar, mostly sucrose, has to be loaded via the bundle sheath into the phloem vascular system (the sieve elements), where it is distributed to growing parts…

Biological Physics · Physics 2014-10-14 Julia Dölger , Hanna Rademaker , Johannes Liesche , Alexander Schulz , Tomas Bohr

With the need to feed a growing world population, the efficiency of crop production is of paramount importance. To support breeding and field management, various characteristics of the plant phenotype need to be measured -- a time-consuming…

The investigation of plant transcriptional regulation constitutes a fundamental basis for crop breeding, where cis-regulatory elements (CREs), as the key factor determining gene expression, have become the focus of crop genetic improvement…

Genomics · Quantitative Biology 2025-05-16 Yingjun Wu , Jingyun Huang , Liang Ming , Pengcheng Deng , Maojun Wang , Zeyu Zhang

Urban systems are composed by complex couplings of several components, and more particularly between the built environment and transportation networks. Their interaction is involved in the emergence of the urban form. We propose in this…

Physics and Society · Physics 2018-12-03 Juste Raimbault

This work presents a mathematical model which describes both the genesis and growth of oxygenic photogranules (OPGs) and the related treatment process. The photogranule has been modelled as a free boundary domain with radial symmetry, which…

Populations and Evolution · Quantitative Biology 2021-04-27 A. Tenore , M. R. Mattei , L. Frunzo

Understanding plant growth dynamics is essential for applications in agriculture and plant phenotyping. We present the Growth Modelling (GroMo) challenge, which is designed for two primary tasks: (1) plant age prediction and (2) leaf count…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Ruchi Bhatt , Shreya Bansal , Amanpreet Chander , Rupinder Kaur , Malya Singh , Mohan Kankanhalli , Abdulmotaleb El Saddik , Mukesh Kumar Saini

Type 1 Diabetes is a chronic autoimmune condition in which the immune system attacks and destroys insulin-producing beta cells in the pancreas, resulting in little to no insulin production. Insulin helps glucose in your blood enter your…

Quantitative Methods · Quantitative Biology 2025-02-04 Soon Jynn Chu , Nalaka Amarasiri , Sandesh Giri , Priyata Kafle

A major challenge in plant developmental biology is to understand how plant growth is coordinated by interacting hormones and genes. To meet this challenge, it is important to not only use experimental data, but also formulate a…

Applications · Statistics 2019-10-22 Samuel E. Jackson , Ian Vernon , Junli Liu , Keith Lindsey

The stabilization of macromolecules is fundamental to developing biological formulations, such as vaccines and protein therapeutics. In this study, we employ coarse grained polymer models to investigate the impact of four sugars:…

Soft Condensed Matter · Physics 2025-11-26 Praveen Muralikrishnan , Jonathan W. P. Zajac , Caryn L. Heldt , Sarah L. Perry , Sapna Sarupria

Maize, a crucial crop globally cultivated across vast regions, especially in sub-Saharan Africa, Asia, and Latin America, occupies 197 million hectares as of 2021. Various statistical and machine learning models, including mixed-effect…

Machine Learning · Statistics 2024-05-13 Lorenzo Valleggi , Marco Scutari , Federico Mattia Stefanini

Accurate prediction of grape phenology is essential for timely vineyard management decisions, such as scheduling irrigation and fertilization, to maximize crop yield and quality. While traditional biophysical models calibrated on historical…

Machine Learning · Computer Science 2025-08-07 William Solow , Sandhya Saisubramanian

Large-scale pre-trained models like BERT, have obtained a great success in various Natural Language Processing (NLP) tasks, while it is still a challenge to adapt them to the math-related tasks. Current pre-trained models neglect the…

Computation and Language · Computer Science 2021-05-04 Shuai Peng , Ke Yuan , Liangcai Gao , Zhi Tang

Plant traits such as leaf carbon content and leaf mass are essential variables in the study of biodiversity and climate change. However, conventional field sampling cannot feasibly cover trait variation at ecologically meaningful spatial…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Eya Cherif , Arthur Ouaknine , Luke A. Brown , Phuong D. Dao , Kyle R. Kovach , Bing Lu , Daniel Mederer , Hannes Feilhauer , Teja Kattenborn , David Rolnick

This paper theoretically analyzes a phenomenological stochastic model for bacterial growth. This model comprises cell division and the linear growth of cells, where growth rates and cell cycles are drawn from lognormal distributions. We…

Biological Physics · Physics 2016-06-28 Ken Yamamoto , Jun-ichi Wakita

Crop biomass, a critical indicator of plant growth, health, and productivity, is invaluable for crop breeding programs and agronomic research. However, the accurate and scalable quantification of crop biomass remains inaccessible due to…

Computer Vision and Pattern Recognition · Computer Science 2024-09-16 Xuesong Li , Zeeshan Hayder , Ali Zia , Connor Cassidy , Shiming Liu , Warwick Stiller , Eric Stone , Warren Conaty , Lars Petersson , Vivien Rolland