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The selection of penalty hyperparameters is a critical aspect in Nonnegative Matrix Factorization (NMF), since these values control the trade-off between reconstruction accuracy and adherence to desired constraints. In this work, we focus…

Machine Learning · Computer Science 2025-12-29 Laura Selicato , Flavia Esposito , Andersen Ang , Nicoletta Del Buono , Rafal Zdunek

This study presents a novel integration of unsupervised learning and decision-making strategies for the advanced analysis of 4D-STEM datasets, with a focus on non-negative matrix factorization (NMF) as the primary clustering method. Our…

Machine Learning · Computer Science 2025-11-18 Junhao Cao , Nicolas Folastre , Gozde Oney , Edgar Rauch , Stavros Nicolopoulos , Partha Pratim Das , Arnaud Demortière

Non-negative matrix factorization (NMF) is a common method for generating topic models from text data. NMF is widely accepted for producing good results despite its relative simplicity of implementation and ease of computation. One…

Machine Learning · Computer Science 2016-08-09 Brendan Gavin , Vijay Gadepally , Jeremy Kepner

Semi-Nonnegative Matrix Factorization (semi-NMF) extends classical Nonnegative Matrix Factorization (NMF) by allowing the basis matrix to contain both positive and negative entries, making it suitable for decomposing data with mixed signs.…

Machine Learning · Computer Science 2025-08-12 Lu Chenggang

Non-negative Matrix Factorization (NMF) is a popular tool for data exploration. Bayesian NMF promises to also characterize uncertainty in the factorization. Unfortunately, current inference approaches such as MCMC mix slowly and tend to get…

Machine Learning · Statistics 2016-10-28 M. Arjumand Masood , Finale Doshi-Velez

We introduce negative binomial matrix factorization (NBMF), a matrix factorization technique specially designed for analyzing over-dispersed count data. It can be viewed as an extension of Poisson matrix factorization (PF) perturbed by a…

Machine Learning · Computer Science 2018-01-08 Olivier Gouvert , Thomas Oberlin , Cédric Févotte

Nonnegative matrix factorization (NMF) is a known unsupervised data-reduction method. The principle of the common cause (PCC) is a basic methodological approach in probabilistic causality, which seeks an independent mixture model for the…

Machine Learning · Computer Science 2025-09-09 E. Khalafyan , A. E. Allahverdyan , A. Hovhannisyan

Nonnegative Matrix Factorization (NMF) is a powerful tool for decomposing mixtures of audio signals in the Time-Frequency (TF) domain. In the source separation framework, the phase recovery for each extracted component is necessary for…

Sound · Computer Science 2016-11-17 Paul Magron , Roland Badeau , Bertrand David

Blind source separation (BSS) is a very popular technique to analyze multichannel data. In this context, the data are modeled as the linear combination of sources to be retrieved. For that purpose, standard BSS methods all rely on some…

Applications · Statistics 2015-06-23 Jerome Bobin , Jeremy Rapin , Anthony Larue , Jean-Luc Starck

We apply a recently developed method for classifying broad absorption line quasars (BALQSOs) to the latest QSO catalogue constructed from Data Release 5 of the Sloan Digital Sky Survey. Our new hybrid classification scheme combines the…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-13 S. Scaringi , C. E. Cottis , C. Knigge , M. R. Goad

Symmetric nonnegative matrix factorization (SymNMF) has important applications in data analytics problems such as document clustering, community detection and image segmentation. In this paper, we propose a novel nonconvex variable…

Optimization and Control · Mathematics 2017-03-27 Songtao Lu , Mingyi Hong , Zhengdao Wang

Non-negative Matrix Factorization (NMF) is a powerful technique for analyzing regularly-sampled data, i.e., data that can be stored in a matrix. For audio, this has led to numerous applications using time-frequency (TF) representations like…

Audio and Speech Processing · Electrical Eng. & Systems 2025-07-10 Krishna Subramani , Paris Smaragdis , Takuya Higuchi , Mehrez Souden

Nonnegative Matrix Factorization (NMF) has been a popular representation method for pattern classification problem. It tries to decompose a nonnegative matrix of data samples as the product of a nonnegative basic matrix and a nonnegative…

Machine Learning · Statistics 2013-12-06 Jim Jing-Yan Wang

Given a symmetric nonnegative matrix $A$, symmetric nonnegative matrix factorization (symNMF) is the problem of finding a nonnegative matrix $H$, usually with much fewer columns than $A$, such that $A \approx HH^T$. SymNMF can be used for…

Numerical Analysis · Computer Science 2016-10-07 Arnaud Vandaele , Nicolas Gillis , Qi Lei , Kai Zhong , Inderjit Dhillon

Over the past few years, there has been a considerable spread of microarray technology in many biological patterns, particularly in those pertaining to cancer diseases like leukemia, prostate, colon cancer, etc. The primary bottleneck that…

Quantitative Methods · Quantitative Biology 2020-07-20 Parth Patel , Kalpdrum Passi , Chakresh Kumar Jain

We develop an error-free, nonuniform phase-stepping algorithm (nPSA) based on principal component analysis (PCA). PCA-based algorithms typically give phase-demodulation errors when applied to nonuniform phase-shifted interferograms. We…

Signal Processing · Electrical Eng. & Systems 2019-10-02 Manuel Servin , Moises Padilla , Guillermo Garnica , Gonzalo Paez

We present a generalized Non-negative factorization (NMF)-based data reduction pipeline for circumstellar disk and exoplanet detection. By using an adaptable pre-processing routine that applies algorithmic masks and corrections to improper…

Instrumentation and Methods for Astrophysics · Physics 2023-10-10 Sai Krishanth P. M. , Ewan S. Douglas , Justin Hom , Ramya M. Anche , John Debes , Isabel Rebollido , Bin B. Ren

Mixed pixels are presented in hyperspectral images due to low spatial resolution of hyperspectral sensors. Spectral unmixing decomposes mixed pixels spectra into endmembers spectra and abundance fractions. In this paper using of robust…

Computer Vision and Pattern Recognition · Computer Science 2012-12-06 Roozbeh Rajabi , Hassan Ghassemian

Wisps are among the most prominent scattered light artifacts in JWST/NIRCam imaging. They often appear in certain regions of the detectors and contaminate observations at surface-brightness levels relevant for faint-source photometry. We…

Non-negative matrix factorization (NMF) has become a popular machine learning approach to many problems in text mining, speech and image processing, bio-informatics and seismic data analysis to name a few. In NMF, a matrix of non-negative…

Numerical Analysis · Computer Science 2013-03-19 Hugo Van hamme