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Nonnegative matrix factorization (NMF) is a popular dimension reduction technique that produces interpretable decomposition of the data into parts. However, this decompostion is not generally identifiable (even up to permutation and…
Extracting genetic information from a full range of sequencing data is important for understanding diseases. We propose a novel method to effectively explore the landscape of genetic mutations and aggregate them to predict cancer type. We…
Symmetric nonnegative matrix factorization (SNMF) has demonstrated to be a powerful method for data clustering. However, SNMF is mathematically formulated as a non-convex optimization problem, making it sensitive to the initialization of…
Nonnegative matrix factorization is a powerful technique to realize dimension reduction and pattern recognition through single-layer data representation learning. Deep learning, however, with its carefully designed hierarchical structure,…
Motivated by the analysis of nonnegative data objects, a novel Nested Nonnegative Cone Analysis (NNCA) approach is proposed to overcome some drawbacks of existing methods. The application of traditional PCA/SVD method to nonnegative data…
Bayesian model-based clustering is a widely applied procedure for discovering groups of related observations in a dataset. These approaches use Bayesian mixture models, estimated with MCMC, which provide posterior samples of the model…
Nonnegative matrix factorization (NMF) has been widely studied in recent years due to its effectiveness in representing nonnegative data with parts-based representations. For NMF, a sparser solution implies better parts-based…
Semi-Non-negative Matrix Factorization is a technique that learns a low-dimensional representation of a dataset that lends itself to a clustering interpretation. It is possible that the mapping between this new representation and our…
Distributed microphone arrays composed of multiple subarrays enable blind source separation over a wide spatial area. Directly applying fast multichannel nonnegative matrix factorization (FastMNMF) to all subarrays can exploit observations…
In this paper, we propose a new Semi-Nonnegative Matrix Factorization method for 2-dimensional (2D) data, named TS-NMF. It overcomes the drawback of existing methods that seriously damage the spatial information of the data by converting 2D…
Plastic sorting is a very essential step in waste management, especially due to the presence of multilayer plastics. These monomaterial and multimaterial plastics are widely employed to enhance the functional properties of packaging,…
Binary data matrices can represent many types of data such as social networks, votes, or gene expression. In some cases, the analysis of binary matrices can be tackled with nonnegative matrix factorization (NMF), where the observed data…
Nonnegative matrix factorization (NMF) has been actively investigated and used in a wide range of problems in the past decade. A significant amount of attention has been given to develop NMF algorithms that are suitable to model time series…
Nonnegative matrix factorization (NMF) factorizes a non-negative matrix into product of two non-negative matrices, namely a signal matrix and a mixing matrix. NMF suffers from the scale and ordering ambiguities. Often, the source signals…
Symmetric nonnegative matrix factorization (NMF), a special but important class of the general NMF, is demonstrated to be useful for data analysis and in particular for various clustering tasks. Unfortunately, designing fast algorithms for…
Symmetric nonnegative matrix factorization (SNMF) is equivalent to computing a symmetric nonnegative low rank approximation of a data similarity matrix. It inherits the good data interpretability of the well-known nonnegative matrix…
Nonnegative matrix factorization (NMF) is widely used for clustering with strong interpretability. Among general NMF problems, symmetric NMF is a special one that plays an important role in graph clustering where each element measures the…
We apply three data science techniques, Nonnegative Matrix Factorization (NMF), Principal Component Analysis (PCA) and Independent Component Analysis (ICA), to simulated X-ray energy spectra of a particular class of super-massive black…
Nonnegative Matrix Factorization (NMF) is a powerful tool for decomposing mixtures of audio signals in the Time-Frequency (TF) domain. In applications such as source separation, the phase recovery for each extracted component is a major…
Time-frequency representation (TFR) is often used for non-stationary signal analysis. The most intuitive and interpretable TFR is the spectrogram. Recently, a concept of non-negative matrix factorization (NMF) has been successfully applied…