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Related papers: "Glassy" Relaxation in Catalytic Reaction Networks

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Slowing down of the relaxation of the fluctuations around equilibrium is investigated both by stochastic simulations and by analysis of Master equation of reversible reaction networks consisting of resources and the corresponding products…

Statistical Mechanics · Physics 2015-05-18 Akinori Awazu , Kunihiko Kaneko

We show that the dynamics of a laser driven Rydberg gas in the limit of strong dephasing is described by a master equation with manifest kinetic constraints. The equilibrium state of the system is uncorrelated but the constraints in the…

Atomic Physics · Physics 2015-06-16 Igor Lesanovsky , Juan P. Garrahan

We obtain bounds on the Kullback--Leibler divergence to equilibrium for mass-action chemical reaction networks (CRNs) with equilibrium. The associated decay rates are characterized in terms of the singular values of the stoichiometric…

Molecular Networks · Quantitative Biology 2026-02-24 Keisuke Sugie , Dimitri Loutchko , Tetsuya J. Kobayashi

The slow relaxation and aging of glassy systems can be modelled as a Markov process on a simplified rough energy landscape: energy minima where the system tends to get trapped are taken as nodes of a random network, and the dynamics are…

Disordered Systems and Neural Networks · Physics 2020-01-29 Riccardo Giuseppe Margiotta , Reimer Kühn , Peter Sollich

One of the general mechanisms that give rise to the slow cooperative relaxation characteristic of classical glasses is the presence of kinetic constraints in the dynamics. Here we show that dynamical constraints can similarly lead to slow…

Quantum Physics · Physics 2018-07-31 Zhihao Lan , Merlijn van Horssen , Stephen Powell , Juan P. Garrahan

The glassy dynamics in confluent epithelial monolayers is crucial for several biological processes, such as wound healing, embryogenesis, cancer progression, etc. Several experiments have indicated that, unlike particulate systems, the…

Soft Condensed Matter · Physics 2024-07-24 Satyam Pandey , Soumitra Kolya , Padmashree Devendran , Souvik Sadhukhan , Tamal Das , Saroj Kumar Nandi

The transient response to a stimulus and subsequent recovery to a steady state are the fundamental characteristics of a living organism. Here we study the relaxation kinetics of autoregulatory gene networks based on the chemical master…

Molecular Networks · Quantitative Biology 2018-03-06 Chen Jia , Hong Qian , Min Chen , Michael Q. Zhang

In polymers melts and supercooled liquids, the glassy dynamics is characterized by the rattling of monomers or particles in the cage formed by their neighbors. Recently, a direct correlation in such systems, described by a universal scaling…

Soft Condensed Matter · Physics 2010-09-09 Cristiano De Michele , Emanuela Del Gado , Dino Leporini

Upon cooling, glass-forming liquids experience a two-step relaxation associated to the cage rattling and the escape from the cage, and the following decoupling between the \b{eta}- and the {\alpha}-relaxations. The found decoupling…

Disordered Systems and Neural Networks · Physics 2017-06-07 P. Luo , P. Wen , H. Y. Bai , B. Ruta , W. H. Wang

Glassy, nonexponential relaxations in globular proteins are typically attributed to conformational behaviors that are missing from intrinsically disordered proteins. Yet, we show that single molecules of a disordered-protein construct…

Soft Condensed Matter · Physics 2020-07-30 Ian L. Morgan , Ram Avinery , Gil Rahamim , Roy Beck , Omar A. Saleh

The dynamical properties of the site frustrated percolation model are investigated and compared with those of glass forming liquids. When the density of the particles on the lattice becomes high enough, the dynamics of the model becomes…

Statistical Mechanics · Physics 2009-10-30 S. Scarpetta , A. de Candia , A. Coniglio

We use computer simulations to study the relaxation dynamics of a model for oil-in-water microemulsion droplets linked with telechelic polymers. This system exhibits both gel and glass phases and we show that the competition between these…

Soft Condensed Matter · Physics 2015-05-29 Pinaki Chaudhuri , Pablo I. Hurtado , Ludovic Berthier , Walter Kob

Dynamically crosslinked semiflexible biopolymers such as the actin cytoskeleton govern the mechanical behavior of living cells. Semiflexible biopolymers nonlinearly stiffen in response to mechanical loads, whereas the crosslinker dynamics…

Soft Condensed Matter · Physics 2019-06-05 Yuval Mulla , F. C. MacKintosh , Gijsje H. Koenderink

Understanding the slowest relaxations of complex systems, such as relaxation of glass-forming materials, diffusion in nanoclusters, and folding of biomolecules, is important for physics, chemistry, and biology. For a kinetic system, the…

Mesoscale and Nanoscale Physics · Physics 2018-03-14 Teruaki Okushima , Tomoaki Niiyama , Kensuke S. Ikeda , Yasushi Shimizu

We consider the problem of slow activation dynamics in glassy systems undergoing a random first order phase transition. Using an effective potential approach to supercooled liquids, we determine the spectrum of activation barriers for…

Disordered Systems and Neural Networks · Physics 2013-05-29 Maxim Dzero , Joerg Schmalian , Peter G. Wolynes

Slow relaxation and heterogeneous dynamics are characteristic features of glasses. The presence of glassy dynamics in nonequilibrium systems, such as active matter, is of significant interest due to its implications for living systems and…

Soft Condensed Matter · Physics 2024-06-27 Antina Ghosh , Sayan Maity , Vijayakumar Chikkadi

Understanding the dynamics of strongly interacting disordered quantum systems is one of the most challenging problems in modern science, due to features such as the breakdown of thermalization and the emergence of glassy phases of matter.…

Quantum Physics · Physics 2021-01-27 A. Signoles , T. Franz , R. Ferracini Alves , M. Gärttner , S. Whitlock , G. Zürn , M. Weidemüller

We report a molecular dynamics (MD) study of the collective dynamics of a simple monatomic liquid -interacting through a two body potential that mimics that of lithium- across the liquid-glass transition. In the glassy phase we find…

Disordered Systems and Neural Networks · Physics 2009-11-07 T. Scopigno , G. Ruocco , F. Sette , G. Viliani

Slow conductance relaxations are observable in a many condensed matter systems. These are sometimes described as manifestations of a glassy phase. The underlying mechanisms responsible for the slow dynamics are often due to structural…

Disordered Systems and Neural Networks · Physics 2008-11-21 Z. Ovadyahu

Activity-mediated unjamming of a confluent glassy system is crucial for several biological processes, such as embryogenesis and cancer metastasis. During these processes, the cells progressively change their junction properties,…

Soft Condensed Matter · Physics 2025-05-13 Souvik Sadhukhan , Chandan Dasgupta , Saroj Kumar Nandi
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