Related papers: Pattern avoidance in binary trees

Building off recent work of Garg and Peng, we continue the investigation into classical and consecutive pattern avoidance in rooted forests, resolving some of their conjectures and questions and proving generalizations whenever possible.…

Phylogenetic networks generalise phylogenetic trees and allow for the accurate representation of the evolutionary history of a set of present-day species whose past includes reticulate events such as hybridisation and lateral gene transfer.…

We prove several Wilf-equivalences for vincular patterns of length 4, some of which generalize to infinite families of vincular patterns. We also present functional equations for the generating functions for the number of permutations of…

We define a class L_{n, k} of permutations that generalizes alternating (up-down) permutations and give bijective proofs of certain pattern-avoidance results for this class. As a special case of our results, we give two bijections between…

Classification of datasets into two or more distinct classes is an important machine learning task. Many methods are able to classify binary classification tasks with a very high accuracy on test data, but cannot provide any easily…

A set partition avoids a pattern if no subdivision of that partition standardizes to the pattern. There exists a bijection between set partitions and restricted growth functions (RGFs) on which Wachs and White defined four statistics of…

Permutations whose prefixes contain at least as many ascents as descents are called ballot permutations. Lin, Wang, and Zhao have previously enumerated ballot permutations avoiding small patterns and have proposed the problem of enumerating…

Null models of binary phylogenetic trees are useful for testing hypotheses on real world phylogenies. In this paper we consider phylogenies as binary trees without edge lengths together with a sampling measure and encode them as algebraic…

Rooted binary perfect phylogenies provide a generalization of rooted binary unlabeled trees in which each leaf is assigned a positive integer value that corresponds in a biological setting to the count of the number of indistinguishable…

The ratio of two densities provides a direct characterization of their differences. We consider the two-sample comparison problem by estimating this ratio given i.i.d. observations from two distributions. To this end, we propose additive…

Reverse search is a convenient method for enumerating structured objects, that can be used both to address theoretical issues and to solve data mining problems. This method has already been successfully developed to handle unordered trees.…

An inversion sequence of length $n$ is an integer sequence $(a_1, \ldots, a_n)$ such that $0 \le a_i < i$ for all $i$. The study of pattern-avoiding inversion sequences was initiated in 2015 by Mansour and Shattuck and in 2016 by Corteel,…

This paper presents a collection of experimental results regarding permutation pattern avoidance, focusing on cases where there are "many" patterns to be avoided.

Networks are ubiquitous in biology and computational approaches have been largely investigated for their inference. In particular, supervised machine learning methods can be used to complete a partially known network by integrating various…

In this paper we continue the study of permutations avoiding the vincular pattern $1-32-4$ by constructing a generating tree with a single label for these permutations. This construction finally provides a clearer explanation of why a…

A function on an algebra is congruence preserving if, for any congruence, it maps pairs of congruent elements onto pairs of congruent elements. We show that on the algebra of complete binary trees whose leaves are labeled by letters of an…

We give a parity reversing involution on noncrossing trees that leads to a combinatorial interpretation of a formula on noncrossing trees and symmetric ternary trees in answer to a problem proposed by Hough. We use the representation of…

We classify all bi-vincular patterns of length two and three according to the number of permutations avoiding them. These patterns were recently defined by Bousquet-Melou et. al., and are natural generalizations of Babson and…

Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the…

We target the problem of provably computing the equivalence between two complex expression trees. To this end, we formalize the problem of equivalence between two such programs as finding a set of semantics-preserving rewrite rules from one…