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The concept of graph compositions is related to several number theoretic concepts, including partitions of positive integers and the cardinality of the power set of finite sets. This paper examines graph compositions where the total number…

Combinatorics · Mathematics 2016-02-23 Todd Tichenor

We give an alternate conception of string diagrams as labeled 1-dimensional oriented cobordisms, the operad of which we denote by Cob/O, where O is the set of string labels. The axioms of traced (symmetric monoidal) categories are fully…

Category Theory · Mathematics 2018-06-06 David I. Spivak , Patrick Schultz , Dylan Rupel

We study structures which have arisen in recent work by the present author and Bob Coecke on a categorical axiomatics for Quantum Mechanics; in particular, the notion of strongly compact closed category. We explain how these structures…

Quantum Physics · Physics 2009-10-16 Samson Abramsky

We say that a link $L_1$ is an s-major of a link $L_2$ if any diagram of $L_1$ can be transformed into a diagram of $L_2$ by changing some crossings and smoothing some crossings. This relation is a partial ordering on the set of all prime…

Geometric Topology · Mathematics 2008-06-24 Toshiki Endo , Tomoko Itoh , Kouki Taniyama

We propose a novel unsupervised approach for linking records across arbitrarily many files, while simultaneously detecting duplicate records within files. Our key innovation is to represent the pattern of links between records as a {\em…

Computation · Statistics 2014-03-04 Rebecca C. Steorts , Rob Hall , Stephen E. Fienberg

The free energy of a multi-component scalar field theory is considered as a functional W[G,J] of the free correlation function G and an external current J. It obeys non-linear functional differential equations which are turned into…

High Energy Physics - Theory · Physics 2007-05-23 Boris Kastening

We introduce a new very large family of transformations of rectangular diagrams of links that preserve the isotopy class of the link. We provide an example when two diagrams of the same complexity are related by such a transformation and…

Geometric Topology · Mathematics 2021-09-01 Ivan Dynnikov , Vera Sokolova

Graphical models for finite-dimensional spin glasses and real-world combinatorial optimization and satisfaction problems usually have an abundant number of short loops. The cluster variation method and its extension, the region graph…

Disordered Systems and Neural Networks · Physics 2013-07-29 Haijun Zhou , Chuang Wang

Graphs that are critical (minimal excluded minors) for embeddability in surfaces are studied. In Part I we consider the structure of graphs with a 2-vertex-cut that are critical with respect to the Euler genus. A general theorem describing…

Combinatorics · Mathematics 2020-02-04 Bojan Mohar , Petr Škoda

Given a finite set T of maps on a finite ring R, we look at the finite simple graph G=(V,E) with vertex set V=R and edge set E={(a,b) | exists t in T, b=t(a), b not equal to a}. An example is when R=Z_n and T consists of a finite set of…

Dynamical Systems · Mathematics 2013-11-27 Oliver Knill

Trellises are crucial graphical representations of codes. While conventional trellises are well understood, the general theory of (tail-biting) trellises is still under development. Iterative decoding concretely motivates such theory. In…

Information Theory · Computer Science 2014-02-27 David Conti , Nigel Boston

Categorical probability has recently seen significant advances through the formalism of Markov categories, within which several classical theorems have been proven in entirely abstract categorical terms. Closely related to Markov categories…

Category Theory · Mathematics 2023-04-11 Tobias Fritz , Wendong Liang

Deformations of knots and links in ambient space can be studied combinatorially on their diagrams via local modifications called Reidemeister moves. While it is well-known that, in order to move between equivalent diagrams with Reidemeister…

Geometric Topology · Mathematics 2025-04-07 Corentin Lunel , Arnaud de Mesmay , Jonathan Spreer

Recently, Dasbach, Futer, Kalfagianni, Lin, and Stoltzfus extended the notion of a Tait graph by associating a set of ribbon graphs (or equivalently, embedded graphs) to a link diagram. Here we focus on Seifert graphs, which are the ribbon…

Geometric Topology · Mathematics 2013-11-18 Stephen Huggett , Iain Moffatt , Natalia Virdee

In this paper, we introduce \textit{graph-pretzel links}, a generalization of classical pretzel links based on spatial graph projections. As our main result, we investigate a subfamily associated with the complete graph on four vertices to…

Geometric Topology · Mathematics 2026-03-10 Kotaro Shoji

A general result of Epstein and Thurston implies that all link groups are automatic, but the proof provides no explicit automaton. Here we show that the groups of all torus links are groups of fractions of so-called Garside monoids, i.e.,…

Group Theory · Mathematics 2007-05-23 Matthieu Picantin

We describe the structure of 2-connected non-planar toroidal graphs with no K_{3,3}-subdivisions, using an appropriate substitution of planar networks into the edges of certain graphs called toroidal cores. The structural result is based on…

Combinatorics · Mathematics 2008-05-06 Andrei Gagarin , Gilbert Labelle , Pierre Leroux

We study the compactification of the locus parametrizing lines with a fixed intersection to a given line, inside the moduli space of line arrangements in the projective plane constructed for weight one by Hacking-Keel-Tevelev and Alexeev…

Algebraic Geometry · Mathematics 2018-07-25 Kenneth Ascher , Patricio Gallardo

Cobordism categories are known to be compact closed. They can therefore be used to define non-degenerate models of multiplicative linear logic by combining the Int construction with double glueing. In this work we detail such construction…

Logic in Computer Science · Computer Science 2023-10-31 Valentin Maestracci , Thomas Seiller

Recent developments in machine-learning based molecular fragment linking have demonstrated the importance of informing the generation process with structural information specifying the relative orientation of the fragments to be linked.…

Biomolecules · Quantitative Biology 2021-11-05 Markus Fleck , Noah Weber , Christopher Trummer