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Prokaryotes living at extreme environmental temperatures exhibit pronounced signatures in the amino acid composition of their proteins and nucleotide compositions of their genomes reflective of adaptation to their thermal environments.…

Biomolecules · Quantitative Biology 2015-06-26 Konstantin B. Zeldovich , Igor N. Berezovsky , Eugene I. Shakhnovich

In this work we employ various methods of analysis (unfolding simulations and comparative analysis of structures and sequences of proteomes of thermophilic organisms) to show that organisms can follow two major strategies of thermophilic…

Biomolecules · Quantitative Biology 2007-05-23 Igor N. Berezovsky , Eugene I. Shakhnovich

From a purely operational standpoint, the existence of microbes that can grow under extreme conditions, or "extremophiles", leads to the question of how the molecules making up these microbes can maintain both their structure and function.…

Soft Condensed Matter · Physics 2016-03-23 Q. Huang , K. N. Tran , J. M. Rodgers , D. H. Bartlett , R. J. Hemley , T. Ichiye

Production of heat shock proteins are induced when a living cell is exposed to a rise in temperature. The heat shock response of protein DnaK synthesis in E.coli for temperature shifts from temperature T to T plus 7 degrees, respectively to…

Condensed Matter · Physics 2009-10-31 Kristine Bourke Arnvig , Steen Pedersen , Kim Sneppen

The search for biosignatures necessitates developing our understanding of life under different conditions. If life can influence the climate evolution of its planet then understanding the behaviour of life-climate feedbacks under extreme…

Earth and Planetary Astrophysics · Physics 2023-04-05 A. E. Nicholson , N. J. Mayne

A previously established multiscale population genetics model states that fitness can be inferred from the physical properties of proteins under the physiological assumption that a loss of stability by any protein confers the lethal…

Biomolecules · Quantitative Biology 2009-06-03 Peiqiu Chen , Eugene I. Shakhnovich

Environmental stress, such as oxidative or heat stress, induces the activation of the Heat Shock Response (HSR) which leads to an increase in the heat shock proteins (HSPs) level. These HSPs act as molecular chaperones to maintain…

Biological Physics · Physics 2015-10-02 Sivéry Aude , Emmanuel Courtade , Quentin Thommen

Ultracool dwarfs have emerged as key targets for searches of transiting exoplanets. Precise estimates of the host parameters (including mass, age, and radius) are fundamental to constrain the physical properties of orbiting exoplanets. We…

Taking advantage of a recent FORS2/VLT spectroscopic sample of Extreme Horizontal Branch (EHB) stars in $\omega$ Cen, we isolate 38 spectra well suited for detailed atmospheric studies and determine their fundamental parameters ($T_{\rm…

Solar and Stellar Astrophysics · Physics 2015-06-22 Marilyn Latour , Suzanna K. Randall , Gilles Fontaine , Giuseppe Bono , Annalisa Calamida , Pierre Brassard

(Abridged) Aims: We aim to use the progressive heating of the gas caused by the feedback of high-mass young stellar objects (YSOs) to prove the statistical validity of the most common schemes used to define an evolutionary sequence for…

Astrophysics of Galaxies · Physics 2017-07-05 A. Giannetti , S. Leurini , F. Wyrowski , J. Urquhart , T. Csengeri , K. M. Menten , C. König , R. Güsten

In an effort to derive temperature based criteria of habitability for multicellular life, we investigated the thermal limits of terrestrial poikilotherms, i.e. organisms whose body temperature and the functioning of all vital processes is…

Earth and Planetary Astrophysics · Physics 2017-06-14 Laura Silva , Giovanni Vladilo , Patricia M. Schulte , Giuseppe Murante , Antonello Provenzale

The upcoming extremely large telescopes will provide the first opportunity to search for signs of habitability and life on non-transiting terrestrial exoplanets using high-contrast, high-resolution instrumentation. However, the suite of…

Earth and Planetary Astrophysics · Physics 2025-03-12 Miles H. Currie , Victoria S. Meadows

We use a simple organism lifecycle model to explore the viability of an atmospheric habitable zone (AHZ), with temperatures that could support Earth-centric life, which sits above an environment that does not support life. To illustrate our…

Earth and Planetary Astrophysics · Physics 2017-02-22 Jack S. Yates , Paul I. Palmer , Beth Biller , Charles S. Cockell

The genetic code underlying protein synthesis is a canonical example of a degenerate biological system. Degeneracies in physical and biological systems can be lifted by external perturbations thus allowing degenerate systems to exhibit a…

Genomics · Quantitative Biology 2013-04-23 Arvind R. Subramaniam , Tao Pan , Philippe Cluzel

We have recently completed an observing program with the Australia Telescope Compact Array towards massive star formation regions traced by 6.7 GHz methanol maser emission. We found the molecular cores could be separated into groups based…

Astrophysics · Physics 2007-11-29 S. N. Longmore , M. G. Burton , C. R. Purcell , P. Barnes , J. Ott

Heat shock response is a stress response to temperature changes and a consecutive increase in amounts of unfolded proteins. To restore homeostasis, cells upregulate chaperones facilitating protein folding by means of transcription factors…

Biological Physics · Physics 2015-06-11 Masayo Inoue , Namiko Mitarai , Ala Trusina

Theory and observation for the search for life on exoplanets via atmospheric "biosignature gases" is accelerating, motivated by the capabilities of the next generation of space- and ground-based telescopes. The most observationally…

Earth and Planetary Astrophysics · Physics 2021-07-27 S. Seager , J. Huang , J. J. Petkowski , M. Pajusalu

We have developed a 1D planetary atmosphere model that solves in a self-consistent manner the evolution of temperature and disequilibrium chemistry in the vertical direction. Thermochemical kinetics is based on a reaction network built from…

Earth and Planetary Astrophysics · Physics 2025-06-16 Marcelino Agundez

Epigenome modulation in response to the environment potentially provides a mechanism for organisms to adapt, both within and between generations. However, neither the extent to which this occurs, nor the molecular mechanisms involved are…

A central problem when studying adaptation to a new environment is the interplay between genetic variation and phenotypic plasticity. Arabidopsis thaliana has colonized a wide range of habitats across the world and it is therefore an…

Populations and Evolution · Quantitative Biology 2014-12-22 Xia Shen , Simon Forsberg , Mats Pettersson , Zheya Sheng , Orjan Carlborg
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