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Biological systems are modular, and this modularity evolves over time and in different environments. A number of observations have been made of increased modularity in biological systems under increased environmental pressure. We here…

Populations and Evolution · Quantitative Biology 2015-01-07 Jeong-Man Park , Liang Ren Niestemski , Michael W. Deem

We construct a two dimensional Cellular Automata based model for the description of pedestrian dynamics. Wide range of complicated pattern formation phenomena in pedestrian dynamics are described in the model, e.g. lane formation, jams in a…

Cellular Automata and Lattice Gases · Physics 2012-11-29 Quntao Zhuang

Hybrid models of chemotaxis combine agent-based models of cells with partial differential equation models of extracellular chemical signals. In this paper, travelling wave properties of hybrid models of bacterial chemotaxis are…

Biological Physics · Physics 2013-02-13 Benjamin Franz , Chuan Xue , Kevin J. Painter , Radek Erban

The essential ingredient for studying the phenomena of emergence is the ability to generate and manipulate emergent systems that span large scales. Cellular automata are the model class particularly known for their effective scalability but…

Neural and Evolutionary Computing · Computer Science 2023-06-13 Sina Khajehabdollahi , Emmanouil Giannakakis , Victor Buendia , Georg Martius , Anna Levina

In this paper, we propose a new approach for building cellular automata to solve real-world segmentation problems. We design and train a cellular automaton that can successfully segment high-resolution images. We consider a colony that…

Computer Vision and Pattern Recognition · Computer Science 2020-08-14 Mark Sandler , Andrey Zhmoginov , Liangcheng Luo , Alexander Mordvintsev , Ettore Randazzo , Blaise Agúera y Arcas

A cellular automata approach using a Directed Cyclic Graph is used to model interrelationships of fluctuating time, state and space. This model predicts phenomena including a constant and maximum speed at which any moving entity can travel,…

General Relativity and Quantum Cosmology · Physics 2007-05-23 Daniel Brown

Cellular automata and other discrete dynamical systems have long been studied as models of emergent complexity. Recently, neural cellular automata have been proposed as models to investigate the emerge of a more general artificial…

Cellular Automata and Lattice Gases · Physics 2025-07-28 Sanyam Jain , Stefano Nichele

Reaction networks are widely used models to describe biochemical processes. Stochastic fluctuations in the counts of biological macromolecules have amplified consequences due to their small population sizes. This makes it necessary to favor…

Probability · Mathematics 2022-02-28 Daniele Cappelletti , Badal Joshi

Understanding the rules underlying organismal development is a major unsolved problem in biology. Each cell in a developing organism responds to signals in its local environment by dividing, excreting, consuming, or reorganizing, yet how…

Cell Behavior · Quantitative Biology 2025-08-20 Ramya Deshpande , Francesco Mottes , Ariana-Dalia Vlad , Michael P. Brenner , Alma dal Co

This paper concerns the long term behaviour of a growth model describing a random sequential allocation of particles on a finite cycle graph. The model can be regarded as a reinforced urn model with graph-based interactions. It is motivated…

Probability · Mathematics 2018-05-23 Marcelo Costa , Mikhail Menshikov , Vadim Shcherbakov , Marina Vachkovskaia

We propose that a quantum particle in a potential in one space dimension can be described by a probabilistic cellular automaton. While the simple updating rule of the automaton is deterministic, the probabilistic description is introduced…

Quantum Physics · Physics 2022-12-01 C. Wetterich

We study the predictability of emergent phenomena in complex systems. Using nearest neighbor, one-dimensional Cellular Automata (CA) as an example, we show how to construct local coarse-grained descriptions of CA in all classes of Wolfram's…

Cellular Automata and Lattice Gases · Physics 2015-06-26 Navot Israeli , Nigel Goldenfeld

We demonstrate that a local mapping f in a space of bisequences over {0,1} which conserves the number of nonzero sites can be viewed as a deterministic particle system evolving according to a local mapping in a space of increasing…

Cellular Automata and Lattice Gases · Physics 2023-12-18 Henryk Fuks

The rate-limiting step of some enzymatic reactions is a physical step, i.e. diffusion. The efficiency of such reactions can be improved through an increase in the arrival rate of the substrate molecules, e.g. by a directed passage of…

Biological Physics · Physics 2007-05-23 Mehrdad Ghaemi , Nasrollah Rezaei-Ghaleh , Mohammad-Nabi Sarbolouki

Probabilistic Cellular Automata are extended stochastic systems, widely used for modelling phenomena in many disciplines. The possibility of controlling their behaviour is therefore an important topic. We shall present here an approach to…

Cellular Automata and Lattice Gases · Physics 2024-03-07 Franco Bagnoli , Sara Dridi , Samira El Yacoubi , Raul Rechtman

Quantum cellular automata (QCAs) are automorphisms of tensor product algebras that preserve locality, with local quantum circuits as a simple example. We study approximate QCAs, where the locality condition is only satisfied up to a small…

Quantum Physics · Physics 2026-03-10 Daniel Ranard , Michael Walter , Freek Witteveen

In this paper we present a quantization of Cellular Automata. Our formalism is based on a lattice of qudits, and an update rule consisting of local unitary operators that commute with their own lattice translations. One purpose of this…

Quantum Physics · Physics 2008-02-17 Carlos A. Perez-Delgado , Donny Cheung

Systems of reaction-diffusion equations are commonly used in biological models of food chains. The populations and their complicated interactions present numerous challenges in theory and in numerical approximation. In particular,…

Numerical Analysis · Mathematics 2015-10-28 Matthew Beauregard , Joshua Padgett , Rana Parshad

Rule 22 elementary cellular automaton (ECA) has a 3--cell neighborhood, binary cell states, where a cell takes state `1' if there is exactly one neighbor, including the cell itself, in state `1'. In Boolean terms the cell-state transition…

Cellular Automata and Lattice Gases · Physics 2020-05-05 Genaro J. Martinez , Andrew Adamatzky , Rolf Hoffmann , Dominique Deserable , Ivan Zelinka

In this paper, we design distributed multi-modal localization approaches for Connected and Automated vehicles. We utilize information diffusion on graphs formed by moving vehicles, based on Adapt-then-Combine strategies combined with the…

Signal Processing · Electrical Eng. & Systems 2024-11-07 Nikos Piperigkos , Aris S. Lalos , Kostas Berberidis